Query= MSMg01no074_o19.b1 MSMg01no074_o19.b1 CHROMAT_FILE:
MSMg01no074_o19.b1 PHD_FILE: MSMg01no074_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:27 2005
(579 letters)
>mm_chr1_10935135_10936114
Length = 980
Score = 1046 bits (541), Expect = 0.0
Identities = 564/575 (98%), Gaps = 7/575 (1%)
Strand = Plus / Plus
Query: 6 gaattcacactcagttctcatttctggcatagcttcccctattcc-tatcaacctcttaa 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 206 gaattcacactcagttctcatttctggcatagcttcccctattccatatcaacctcttaa 265
Query: 65 cctgttccctgtatttgctccctgtcttctgtaaattctaaaactagagctggcatccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cctgttccctgtatttgctccctgtcttctgtaaattctaaaactagagctggcatccca 325
Query: 125 taactatggcttcatgccaactctgcttccataagctagtccttgctccataaagagccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taactatggcttcatgccaactctgcttccataagctagtccttgctccataaagagccc 385
Query: 185 acatgttcccagttactcattctgttcccatgatcataagcaggccaaaactcaatgttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acatgttcccagttactcattctgttcccatgatcataagcaggccaaaactcaatgttt 445
Query: 245 cactatgttgcttttatctctactgagcaaatgcctggaacaaaactggtcagtaagcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cactatgttgcttttatctctactgagcaaatgcctggaacaaaactggtcagtaagcat 505
Query: 305 gagataaatatttattgaataaatgttgcctgtgttttatatcaacctctgatttttaac 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 506 gagataaatatttattgaataaatgttgcctgtgttttatatcagcctctgatttttaac 565
Query: 365 tagaatgatgggttcagcaacaatgtcctggtcagctttctgattctgtgacaaagtagg 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tagaataatgggttcagcaacaatgtcctggtcagctttctgattctgtgacaaagtagg 625
Query: 425 tgagaaaaatcaccttaatgggctgtgcagtgcagagaggtcaggtcagccctgacatca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgagaaaaatcaccttaatgggctgtgcagtgcagagaggtcaggtcagccctgacatca 685
Query: 485 tgcttacagcaacattgtacaagctgagcaggttatatttaggaatatatatgtatctgc 544
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgcttacagcagcattgtacaaactgagcaggttatatttaggaatatatatgtatctgc 745
Query: 545 atatatatatatatatgcaaaaataatttataaag 579
|||||||||| |||||||||||||||||||
Sbjct: 746 atatatatat------gcaaaaataatttataaag 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space: 551930
Effective search space used: 551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_o19.g1 MSMg01no074_o19.g1 CHROMAT_FILE:
MSMg01no074_o19.g1 PHD_FILE: MSMg01no074_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:27 2005
(576 letters)
>mm_chr1_11084620_11085596
Length = 977
Score = 830 bits (429), Expect = 0.0
Identities = 444/449 (98%), Gaps = 1/449 (0%)
Strand = Plus / Minus
Query: 1 taccttcctgtagcc-aattaactcaaataagattattacagtcttagatgcctaaatag 59
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 449 taccttcctgtagccaaattaactcaaataagattattacagtcttagatgtctaaatag 390
Query: 60 agtctgggatgtcatgctaaaaggtttgaagaaaatagagcctattcaactttagttaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agtctgggatgtcatgctaaaaggtttgaagaaaatagagcctattcaactttagttaga 330
Query: 120 gctttagttagagttagagtcaggaagttcagttgctccaaaatcattttcaagtttcac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gctttagttagagttagagtcaggaagttcagttgctccaaaatcattttcaagtttcac 270
Query: 180 actgtttctattggttatctgacctacaccatttctgtaaagttaacttttatttgaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 actgtttctattggttatctgacctacaccatttctgtaaagttaacttttatttgaaaa 210
Query: 240 gtccacagctgtcatagttaaagttactattggtatgatgaaacatcacagttcaaacca 299
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 209 gtccacagctgtcatagttaaagttactattggtatgatgaaacatcacagcccaaacca 150
Query: 300 agctgggaaagaaagcgtttattcagcttacacttccatatggcagttgatcattaaagg 359
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 agttgggaaagaaagcgtttattcagcttacacttccatatggcagttgatcattaaagg 90
Query: 360 aagtcaaacaggacagaaagctgatgcagaggttagggaggagtgcttcttattggcttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aagtcaaacaggacagaaagctgatgcagaggttagggaggagtgcttcttattggcttg 30
Query: 420 cttcatctgactttctcagcctgcaggac 448
|||||||||||||||||||||||||||||
Sbjct: 29 cttcatctgactttctcagcctgcaggac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 977
Length adjustment: 10
Effective length of query: 566
Effective length of database: 967
Effective search space: 547322
Effective search space used: 547322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
