ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTGTTCACCCCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTG
AAGTCTACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTACCCTATC
TGATTTAGGATAGGTAAAGTTCCTTTCCCAATCTGTTGGTCGTCTTTTTG
TCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGGGGTTTCATGAGG
TCCCATTTGTCAATTGTCGATCTTACAGCACAAGCCATTGCTGTTCTATT
CAGAAAATTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCACTTTCT
CCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCAG
TTAGATTTGACCCCACCCACAAGGAGATAGGTATGGATTGATTCGCATTC
TTCTACATGTTAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTG
TCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACC
ATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTA
CTTGTCTGTCATTTATACCAGTACCATGCAGGTTTTATCACAATTGCTCT
GTAATAAAGCTTTAGGGTCAGGCATGGTGN

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATGGAACATTACTTTTTGGATGCTAT
CTGATAAGTATGAAAAATTTAGTAAGCATTTTAAAATACATAATTTGTCA
AAAAATTATAATATTTTGTCAATGGAGAACTTATACCTTCAGAAGTAAAC
TATATGGTTTATCTGGGTAAATGACATTTTCCATTTAAAAACTTTTGTTA
AATATGATATAGTTACACTTCTACTATTTATATTGTCTTAATTTCAGGGA
TTAGCATGCAAGTAGCCACAAGCTTTCTTTGTATTTATGCGGTGAGCAAA
CATGATTACGTGGTAAAAGAAAATACTGAGAGTCTGAATACACCTGTGAA
GAGTAAAAAAGCAAAAACCCAACATGGCAAAGATTAATTACAAACTGATT
TCATCATTGTGTAAGGATTGTTTGCTTTCCCTTCAATGAAATATATTGAT
AATTTAAAAACAATAATTGTGAATAATTGCATCTAAAGGTATGCTTCATA
TTATCACACAATTTTTATTTGGAATGTAAAACTACTGTTTGTGCTAAGAT
TGCTGAAGATATTATGAAACATACAGTTTTGTTAACACCTAAAAAATATT
CTACATATTTTTTCTCTTTCTCTCATAAAATATN

Query= MSMg01no075_h13.g1 MSMg01no075_h13.g1 CHROMAT_FILE:
MSMg01no075_h13.g1 PHD_FILE: MSMg01no075_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:08 2005
         (601 letters)



>mm_chr1_99198289_99199289
          Length = 1001

 Score = 1123 bits (581), Expect = 0.0
 Identities = 596/601 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaacattactttttggatgctatctgataagtatgaaaaatttagtaagcattttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggaacattactttttggatgctatctgataagtatgaaaaatttagtaagcattttaa 260

                                                                       
Query: 61  aatacataatttgtcaaaaaattataatattttgtcaatggagaacttataccttcagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 aatacataatttgtcaaaaaattataatattttgtcaatggagaactaataccttcagaa 320

                                                                       
Query: 121 gtaaactatatggtttatctgggtaaatgacattttccatttaaaaacttttgttaaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaactatatggtttatctgggtaaatgacattttccatttaaaaacttttgttaaata 380

                                                                       
Query: 181 tgatatagttacacttctactatttatattgtcttaatttcagggattagcatgcaagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatatagttacacttctactatttatattgtcttaatttcagggattagcatgcaagta 440

                                                                       
Query: 241 gccacaagctttctttgtatttatgcggtgagcaaacatgattacgtggtaaaagaaaat 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccacaagcttgctttgtatttatgcggtgagcaaacatgattacgtggtaaaagaaaat 500

                                                                       
Query: 301 actgagagtctgaatacacctgtgaagagtaaaaaagcaaaaacccaacatggcaaagat 360
           ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||
Sbjct: 501 actgagagtctgaatacacctgtgaagagtaaaaaagcaaaaacagaagatggcaaagat 560

                                                                       
Query: 361 taattacaaactgatttcatcattgtgtaaggattgtttgctttcccttcaatgaaatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taattacaaactgatttcatcattgtgtaaggattgtttgctttcccttcaatgaaatat 620

                                                                       
Query: 421 attgataatttaaaaacaataattgtgaataattgcatctaaaggtatgcttcatattat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attgataatttaaaaacaataattgtgaataattgcatctaaaggtatgcttcatattat 680

                                                                       
Query: 481 cacacaatttttatttggaatgtaaaactactgtttgtgctaagattgctgaagatatta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacacaatttttatttggaatgtaaaactactgtttgtgctaagattgctgaagatatta 740

                                                                       
Query: 541 tgaaacatacagttttgttaacacctaaaaaatattctacatattttttctctttctctc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaaacatacagttttgttaacacctaaaaaatattctacatattttttctctttctctc 800

            
Query: 601 a 601
           |
Sbjct: 801 a 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space:   585681
Effective search space used:   585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)