Query= MSMg01no078_c18.b1 MSMg01no078_c18.b1 CHROMAT_FILE:
MSMg01no078_c18.b1 PHD_FILE: MSMg01no078_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:25 2005
(332 letters)
>mm_chr1_32712218_32712949
Length = 732
Score = 530 bits (274), Expect = e-155
Identities = 309/322 (95%), Gaps = 4/322 (1%)
Strand = Plus / Plus
Query: 10 ggaattcatttttgacgcttgcttaacttcatagttccaattatcataagctgataggat 69
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 210 ggaattcatttttgatgcttgcttaacttcatagtttcaattatcataagctgatagtat 269
Query: 70 tagtcattttcctagcttgaagtaaggaggaaaagcattgtattaattcaaacatagata 129
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 270 tagtcattttcctagcttgaagcaaggaggaaaagcattgtattaattcaaacatacata 329
Query: 130 gatacaagtggatatgtttgtgaaacataatgcaatatttaaagcgaatgcattgcatgc 189
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 330 gatacaagtggatatgtttgtgaaacataatgcaatatttaaagagaatgcattgcatgc 389
Query: 190 aaagtcatcacatacttaaaaccaccgccagtgacatgtgtcctccaacaaagctgcatc 249
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 390 aaagtcatcatatacttaaaaccaccgccagtgacatgcgtcctccaacaaagctgcatc 449
Query: 250 tcctaggccttctcacacagaacccttgcctgt--atttcaaggattcaaatgcctgaga 307
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 450 tcctaggccttctcacacagaacccttgcctgtcgat--caaggattcaaatgcctgaga 507
Query: 308 ctatgaggggcatctcattcaa 329
||||||||| ||||||||||||
Sbjct: 508 ctatgagggacatctcattcaa 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_c18.g1 MSMg01no078_c18.g1 CHROMAT_FILE:
MSMg01no078_c18.g1 PHD_FILE: MSMg01no078_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:25 2005
(533 letters)
>mm_chr1_32853359_32854291
Length = 933
Score = 984 bits (509), Expect = 0.0
Identities = 527/533 (98%)
Strand = Plus / Minus
Query: 1 tttggatgaaatagtagagaaatggaaacatagactaatgttgaaaattaaattgaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tttggatgaaatagtagagaaatggaaacatagactaatgttgaaaattaaattgaagtc 574
Query: 61 ctgcaacctgagcaaatgtgtgatgttgagagaattcctactttatatgtcgtttcatta 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctgcaacctgagcgaatgtgtgatgttgagagaattcctactttatatgtcgtttcatta 514
Query: 121 ccattaatttaaagcattagctgttcctgccttatattcataagaataaatgtagtttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ccattaatttaaagcattagctgttcctgccttatattcataagaataaatgtagtttaa 454
Query: 181 tattatcaagtcttctgcaatgctttcagaaaagttttctttgtctcaataactccagga 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tattatcaagtcttctgtaatgctttcagaaaagttttctttgtctcaataactccagga 394
Query: 241 taatatattctattatgcagtttaatatatattatcaagcccactgcacctctttcagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 taatatattctattatgcagtttaatatatattatcaagcccactgcacctctttcagaa 334
Query: 301 aatatttctttgtcttaattaatccagggtaatatattctttaagaagagatattgatat 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 333 aatatttttttgtcttaattaatccagggtaatatattctttaagaagagatactgatat 274
Query: 361 atatgttgcttagacaaatgtctttctttccaggatatactactactttctttttcatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atatgttgcttagacaaatgtctttctttccaggatatactactactttctttttcatgg 214
Query: 421 gaagccccgtgtcttcgggtttcgtttgttgtgataaaatactgtgaccaaaagcaactt 480
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaagccctgtgtcttcgggtttcttttgttgtgataaaatactgtgaccaaaagcaactt 154
Query: 481 ggggctaagggtgaagagttcattttagcttataatcacaatccaccactgag 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ggggctaagggtgaagagttcattttagcttataatcacaatccaccactgag 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
