AAATTTGCGGCGCTAAACNANNCCCTATTCCTAACTGCCNCGNAANNCNN
NGTTTTACNNTANCCTCANNNNNAANGNNNNNANNNGAANNNCNGGANNC
CAGCTNCNNNCNNNCGAANANGGNATTANAGNCCCGNANCAAANNNAGGA
ANGNNAAAAANCCNTTCCCAANCNGAAGNNGNCCNNNNNGNCNAANNAAC
ANNGNCNNNNGCCNNACAAAANCTCNGCNANNNNANAANNTCTTTTTTGN
CAANTCTTGAATCTTAANCACAACCCANGGCNGNNNGGNNNANAAATTNN
NCCCCTTTCCCTAAATTTTCAAGGGCNNNCCCCAANNCCCCCCCNAAATT
TTTTTTCCCCCCCCCACCCCCCCNNNNNNCCTNNNCCCCCTCAANNCNAC
CCTCTCCCCCCCNCNAAAAAAAANNNNCCAAANCCCACCCCCCCNCCCTT
AACCCTCCCNNNTCCNCCCCCCCCCCCCCNAAACACCCCCCNCTTTCTCG
TTTTCATCTTTTTTATGATTTATGTATCTGCTTNNNNNCCNNCCNCNCNN
NAAACNNNNNNNNNNNNNNNNNNCNNNNNNANNNNNNNCNNCCNCCNNCC
CCCNCCCCCCCCCNCCCNCCCNCCCNNCCCCNNCCCCCCCTTTTTTTTTT
TTTTATAAGGAGGGAAAAAGAAAAAGCTCCNCCCNNCNNCCCCCCCCATC
TGTTGGGGGTGTTTTGATTACTTTTTAGTTTTGNNNCCCTCCCCNCCC

TAGAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATGATCTTACTTAATGCTAAAACAGATCAAA
ATGGAGATGCAGCCCATTTAGGCCCTCAGGGTCTGGACTGTATGGAGTGC
TAAACATGATCAGTGAGCCAAGAAGCTGTCATCACCACAATAGCTGGTGC
CAAGAGAGTCCTGAGCAGACTGCTCACTGCTGGCATGCCTCTCTGCCTGA
CAGTGATGCTGATGGTAGGGACACGCTGCTGCTGTTCTGGTCCTTGTCAG
AACAAGAAATCAAAAGCAGTTCTACAAATAGCCATTTCAGTAACTTCTAG
GAACCAAATACAAAACATTACTGTTTTGTGTTAGGGAGAGGGACATCGGA
GGCAGGCTGACATCTGTGCTATGAATGGTACATGCCATGCTTTGTCTTGA
ACAATTATAGCCTTCTCTAGGCAAGCGTGATAACTGGAGGTTGAGAAGAG
ATATCAAACTCTTTATAATCCCTTCTAAATTGTATTTTTAGTTCTACCAA
TGTGCTATTTCTGTAACTACACAGACAAATATATGGTCAGGTAGCTTTAG
CATTTATAAGAGTCTTTCGCTCATAAGCATTAAAGAAAAATCCAGTGAAG
AGAAACAAAAACAGTCAAATCTGACACTTATATGAGAATTAATA

Query= MSMg01no078_h22.g1 MSMg01no078_h22.g1 CHROMAT_FILE:
MSMg01no078_h22.g1 PHD_FILE: MSMg01no078_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:50 2005
         (502 letters)



>mm_chr1_18171092_18171993
          Length = 902

 Score =  948 bits (490), Expect = 0.0
 Identities = 499/502 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatcttacttaatgctaaaacagatcaaaatggagatgcagcccatttaggccctcag 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgatcatacttaatgctaaaacagatcaaaatggagatgcagcccatttaggccctcag 260

                                                                       
Query: 61  ggtctggactgtatggagtgctaaacatgatcagtgagccaagaagctgtcatcaccaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtctggactgtatggagtgctaaacatgatcagtgagccaagaagctgtcatcaccaca 320

                                                                       
Query: 121 atagctggtgccaagagagtcctgagcagactgctcactgctggcatgcctctctgcctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagctggtgccaagagagtcctgagcagactgctcactgctggcatgcctctctgcctg 380

                                                                       
Query: 181 acagtgatgctgatggtagggacacgctgctgctgttctggtccttgtcagaacaagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagtgatgctgatggtagggacacgctgctgctgttctggtccttgtcagaacaagaaa 440

                                                                       
Query: 241 tcaaaagcagttctacaaatagccatttcagtaacttctaggaaccaaatacaaaacatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaaagcagttctacaaatagccatttcagtaacttctaggaaccaaatacaaaacatt 500

                                                                       
Query: 301 actgttttgtgttagggagagggacatcggaggcaggctgacatctgtgctatgaatggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgttttgtgttagggagagggacatcggaggcaggctgacatctgtgctatgaatggt 560

                                                                       
Query: 361 acatgccatgctttgtcttgaacaattatagccttctctaggcaagcgtgataactggag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatgccatgctttgtcttgaacaattatagccttctctaggcaagcgtgataactggag 620

                                                                       
Query: 421 gttgagaagagatatcaaactctttataatcccttctaaattgtatttttagttctacca 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttgagaagagatatcaaattctttataatcccttctaaattgtatttttagttctacca 680

                                 
Query: 481 atgtgctatttctgtaactaca 502
           ||||| ||||||||||||||||
Sbjct: 681 atgtgttatttctgtaactaca 702


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)