CGGCGCTATACGACTCCTATAGTTTCAGAATACGCGGAATTCTTAGCCAA
ATGTCAATCTTTGTCATATTTATGACTCTTCTGATTCTCAAATTGATGAC
AAATATCTAGTATCCTGGGAGAATCTCTTAACAGAGACCATAGATTAGGC
TAGCCAGAATGGTCCTCATGACAGTGTACATCACANAACACAAAGACATA
GNAACATATTTCTCCATATAGGAGTTAAGAGTCATAACCAGATTGAACTG
GGGTTGAAAGAAATATTGATAGGAATTGCCTGGGGAAGAACACTACCTTT
AGGTAGATTATATGGTTTATTTGTGGAATAAAAAAGGCATGAAGTTTGTT
AAAGTTCAAAAACTCCCTTGTTCCTGTCCAGAAGTCCCTTGGCCCCATGT
ATAACCTGGTAAGAAGAAATCTTTCCCCAAAAACCAAAACCTGGCCAAAT
CCTAAAAAATAGGCCCTAAAAACCTGGTTTGCTTGGTTGGCTGGTTGGCT
GGGGGGGGGGGATTAAAAGGGGGCCCGGCCCCCTTTTTAAGGAAACCTGG
GGGGGGGGGGGAAAAAAAAAATTTTTTTTCCTTTTAGGGGGAAAAAATAC
TCTTTGGTTTCTAAAAACCCCAGGGGGTTAATTTTTTGTTAAAGGGGTGT
GTTTGCATTCTGGGGGCGAACTTAAAAAGTTCCCCCGGTGGTAAAAAAAA
AAAACATTTCTTTTCTCCTCCCCCCCCCCTCCTTTCT

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCATTAAATTTGCAGGCAGATGAATGGAACTTGTAAATGTCAT
CCTGAGTGAGGTAACAGTCACAAAAGAACACACAGGGTATGCATTCACTA
ATAAGTGGGTATTATCCCAAAAGTTTGGAATAACCAAGATTCAATTCATA
GACCATATGAAGCCCAAGAAGAGGGAAGACCAAAGTGTGGATTCTTCTGT
GCTTCTTAAAACTGGGGACAAAATACAGGAGGAAATATGGACACAAAGTG
TGGAGCAGAGAATTGTATTTTTGTAAATATGTATGTGAGAGTATGTACAT
ATGTAAGACTTTGTGTATATGTGTGCCTTTAGTATTTATGATTTTCTTTT
AAAATGGGTTGAGACTATTATAAGAATTTCAGATCTGGCCTTCCAAAGTA
ATATCAAAATTTAATCCACTGCTATGGAATGAATCAACAAGGGCCATTCA
CTATAGCTGACATGAGTAAAGTTAAAACAACTTTGGGGTTTTTGTTTGTT
TGTTTGTTTTGTTTTGGGTTTTTTTTTTTTTTCTCTACCCCCCCNTCCTA
CATCCTTCTTTTTCTCTTTTCCCCTCCTCCCCCCCCTCCATCCCACCTTT
TTTCCTTTCTCTTTTTTCTTCCCCTACTCCTCCTTCCATTCCATTTTCTC
TACTCCTCCCCATATCTTCCCTTTTCTCTTTCCTC

Query= MSMg01no079_d21.g1 MSMg01no079_d21.g1 CHROMAT_FILE:
MSMg01no079_d21.g1 PHD_FILE: MSMg01no079_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:49 2005
         (520 letters)



>mm_chr1_14459584_14460502
          Length = 919

 Score =  785 bits (406), Expect = 0.0
 Identities = 471/520 (90%), Gaps = 43/520 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaatttgcaggcagatgaatggaacttgtaaatgtcatcctgagtgaggtaacagtcac 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 242 taaatttgcaggcagatgaatggaacttgtaaatatcatcctgagtgaggtaacagtcac 301

                                                                       
Query: 61  aaaagaacacacagggtatgcattcactaataagtgggtattatcccaaaagtttggaat 120
           |||||||||||||||||||||                                       
Sbjct: 302 aaaagaacacacagggtatgc--------------------------------------- 322

                                                                       
Query: 121 aaccaagattcaattcatagaccatatgaagcccaagaagagggaagaccaaagtgtgga 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 --ccaagattcaattcatagaccatatgaagcccaagaagagggaagaccaaagtgtgga 380

                                                                       
Query: 181 ttcttctgtgcttcttaaaactggggacaaaatacaggaggaaatatggacacaaagtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttctgtgcttcttaaaactggggacaaaatacaggaggaaatatggacacaaagtgt 440

                                                                       
Query: 241 ggagcagagaattgtatttttgtaaatatgtatgtgagagtatgtacatatgtaagactt 300
           ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagcagagaattgtaaacttgtaaatatgtatgtgagagtatgtacatatgtaagactt 500

                                                                       
Query: 301 tgtgtatatgtgtgcctttagtatttatgattttcttttaaaatgggttgagactattat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtatatgtgtgcctttagtatttatgattttcttttaaaatgggttgagactattat 560

                                                                       
Query: 361 aagaatttcagatctggccttccaaagtaatatcaaaatttaatccactgctatggaatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaatttcagatctggccttccaaagtaatatcaaaatttaatccactgctatggaatg 620

                                                                       
Query: 421 aatcaacaagggccattcactatagctgacatgagtaaagttaaaacaactttggggttt 480
           |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 621 aatcaacaagggccattcactatagcagaaatgagtaaagttaaaacaactttggggttt 680

                                                   
Query: 481 ttgtttgtttgtttgttttgttttgggttttttttttttt 520
           |||||||||||||||||||||||  |||||||||||||||
Sbjct: 681 ttgtttgtttgtttgttttgttt--ggttttttttttttt 718


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 919
Length adjustment: 10
Effective length of query: 510
Effective length of database: 909
Effective search space:   463590
Effective search space used:   463590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)