XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ATTATTGATACAATTACATTTCATTAATTAATTAATGACCAAGAATTAAA
TAGTTTCCCATAACTTTGCCAATACTTTTAAAACTTTCATAATGGGTGCC
CAGCCAGTAAACTTTGGATGTAATTATAATTAATCTTAGCATCAGATAAA
ATATTTTAATGTCTCTATAGAGCTAATATTCAATTTCTCATCAGTATTCA
TGACAGAGAATATAACTATTAGTTATTCAGAGAACATTTTCTGATGCAGT
CACCATATATTTATTCTTTCCTTCTTCTGTCTTAGCAATATCACATATGC
CTTTAAAAGGTTTTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCA
TCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTA
CAGGGGAACACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGG
GGTGGGTGGATATGNCNNTNCCTTCCTCTTCCTTCCCTCTCCTCTCCCTT
TTTCCTTCCTCTCCCTTCCTCTTCCCCTTCTCCCTTCTTTTTTTCTCTCC
CTCTCTTTCCTCTCCCTTTCTCTCTTTCCTCTTTTTCCCTCCTCTCCCCC
TCTCTCTCCCTCTTTCTCCCCCCCTCCTTTTCCTCTCCCCTCTCCCCTCC
CCCCCCC

TGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTCTGACAAATGGAGATTCTCCACAGATACT
TAAAAGAACAGCTAAGCTACACTCATACAAGAATTTATCAGGGCCCAGGA
AATAGGGGGGTTGTGGTATTGCATTATTCATGAGAAGGTCTGCTAGAGCA
GAACCTCCTGGTGCTAGCTTTCACAAGGCTCAAGGGAGTAGCTCAAATTG
TGACTAGGGTGTGAAAACCTTGCCTATCATTAAGCTGACCCTATGCAGGA
TTGCTTTATCTTTACTGTAAACATTTACCTGGTTCCTACAAGTCCTTTTG
AAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAATGTACTTTGCCTACT
GTGACATCCTACCCCCTGTATTTTCTGTATTATATAAGTCTGGTGTTCAC
TTTGTGACAATACATTCAGATTCTACACAATCTCGAGTGTTGAGCTGTCT
GTCATTCACAGACTCCTTGCCCATCTGCAACCAGAGACCCGTTCTACATA
GACAAGGGACCAAGAGGGTCTGTGGAAGAGGCTCAATGCCCCAGTGTAGG
GGAATGTCAAGGTGGTGAGGCAGGAGTGGATTGGTGCATGGGGGAGCACC
CTCATAGAGGCAAGGCCCCGGGGGTGGNGGTGGCGATGCCCCCTCCCTCC
TTTCA

Query= MSMg01no079_f08.b1 MSMg01no079_f08.b1 CHROMAT_FILE:
MSMg01no079_f08.b1 PHD_FILE: MSMg01no079_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:56 2005
         (450 letters)



>mm_chr1_96781852_96782701
          Length = 850

 Score =  855 bits (442), Expect = 0.0
 Identities = 448/450 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttacatttcattaattaattaatgaccaagaattaaatagtttcccataactttgccaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ttacatttcattaattaattaatgaccaagaattaaatagtttcccataactttgtcaat 260

                                                                       
Query: 61  acttttaaaactttcataatgggtgcccagccagtaaactttggatgtaattataattaa 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttttaaatctttcataatgggtgcccagccagtaaactttggatgtaattataattaa 320

                                                                       
Query: 121 tcttagcatcagataaaatattttaatgtctctatagagctaatattcaatttctcatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttagcatcagataaaatattttaatgtctctatagagctaatattcaatttctcatca 380

                                                                       
Query: 181 gtattcatgacagagaatataactattagttattcagagaacattttctgatgcagtcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattcatgacagagaatataactattagttattcagagaacattttctgatgcagtcac 440

                                                                       
Query: 241 catatatttattctttccttcttctgtcttagcaatatcacatatgcctttaaaaggttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catatatttattctttccttcttctgtcttagcaatatcacatatgcctttaaaaggttt 500

                                                                       
Query: 301 tagctgcatatatatcaaaagatggcctagtcggccatcactggaaagagaggcccattg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagctgcatatatatcaaaagatggcctagtcggccatcactggaaagagaggcccattg 560

                                                                       
Query: 361 gacttgcaaactttatatgccccagtacaggggaacaccagggccaaaaagggggagtgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacttgcaaactttatatgccccagtacaggggaacaccagggccaaaaagggggagtgg 620

                                         
Query: 421 gtgggcaggggagtgggggtgggtggatat 450
           ||||||||||||||||||||||||||||||
Sbjct: 621 gtgggcaggggagtgggggtgggtggatat 650


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space:   369600
Effective search space used:   369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)