ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCT
GAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTAT
CTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTT
GTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAG
GTCCCATTTGTCAATTCTCGATCTTACAGAGCGAGCCATTGCTGTTCTGT
TCAGGAATTTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCCACTTTC
TCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCA
CTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTC
TTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTG
TCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACC
ATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTA
CTTGTCTGTCTCTATTCCAGTACCATGCAGTTTTTATCACAATTGCCCTG
TAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGATGTTCTTTTATC
CTT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATTTATACAAAACTAGGCACCTTCAGCAC
CACAAAAGATCCCACAACTGTGTAGAGCCAGGAAGGAATGACGAGCTGCT
GCAAAGAGGCATAAGCACATTTTTCATAATAGTGGAAGCAGCTGGTGCAC
AGCTGTCGACCTGGAAAGGAGGAATCACATGTACAACTAAAATCAACACA
TTTTTCTATATGAAAATTATTTCCCAACAGTCTTGATTAAAACATTTAAA
AGATGCTGTGAGTTTAATATTATTTTCCAGAAGGAGTTCTTGTTTTCTCA
AATATTCCAATAAAAAAACTTGGTTTATACTTAAAAAAATGATAGTACTA
TATATAGTTGTTTTTCTAATATCTATTTTTGACAGTTAAGTATTTTTAAA
TTACATTTATGCATTTCATTTGTGTCTGTGTGTGGATATGTGTGTGTGTA
TGGGCGTGTGTGTGTTTGTGGAGGGCAGAGGACCGGAGCTGGCTCTCCTT
CCACTATGTGGGTCCTGAGGGTTAAATTTAGGCCGTCGTTCTTGGTGGCA
AATGACTTTACACATTGATCCACCTCATCATTCCTAAATTTTTTTGTTGC
TGTGACCAAAATCAGGAAGTAGAACTTTCTATACTCTAAATTATGCCAAG
ATTTA

Query= MSMg01no079_p04.g1 MSMg01no079_p04.g1 CHROMAT_FILE:
MSMg01no079_p04.g1 PHD_FILE: MSMg01no079_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:42 2005
         (631 letters)



>mm_chr1_16324770_16325799
          Length = 1030

 Score = 1143 bits (591), Expect = 0.0
 Identities = 621/633 (98%), Gaps = 5/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catttatacaaaactaggcaccttcagcaccacaaaagatcccacaactgtgtagagcca 60
           ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 201 catttatacaaaactaggcaccttcagcaccacaaaagatcc---aactgtgtagagcca 257

                                                                       
Query: 61  ggaaggaatgacgagctgctgcaaagaggcataagcacatttttcataatagtggaagca 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gggaggaatgacgagctgctgcaaagaggcataagcacatttttcataatagtggaagca 317

                                                                       
Query: 121 gctggtgcacagctgtcgacctggaaaggaggaatcacatgtacaactaaaatcaacaca 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gctggtgcacagctgttgacctggaaaggaggaatcacatgtacaactaaaatcaacaca 377

                                                                       
Query: 181 tttttctatatgaaaattatttcccaacagtcttgattaaaacatttaaaagatgctgtg 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tttttctaaatgaaaattatttcccaacagtcttgattaaaacatttaaaagatgctgtg 437

                                                                       
Query: 241 agtttaatattattttccagaaggagttcttgttttctcaaatattccaataaaaaaa-- 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 438 agtttaatattattttccagaaggagttcttgttttctcaaatattccaataaaaaaaaa 497

                                                                       
Query: 299 cttggtttatacttaaaaaaatgatagtactatatatagttgtttttctaatatctattt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cttggtttatacttaaaaaaatgatagtactatatatagttgtttttctaatatctattt 557

                                                                       
Query: 359 ttgacagttaagtatttttaaattacatttatgcatttcatttgtgtctgtgtgtggata 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttgacagttaagtatttttaaattacatttatgcatttcatttgtgtctgtgtgtggata 617

                                                                       
Query: 419 tgtgtgtgtgtatgggcgtgtgtgtgtttgtggagggcagaggaccggagctggctctcc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgtgtgtgtgtatgggcgtgtgtgtgtttgtggagggcagaggaccggagctggctctcc 677

                                                                       
Query: 479 ttccactatgtgggtcctgagggttaaatttaggccgtcgttcttggtggcaaatgactt 538
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 678 ttccactatgtgggtcctgagggttaaatttaggccgtcgctcttggtggcaaatgactt 737

                                                                       
Query: 539 tacacattgatccacctcatcattcctaaatttttttgttgctgtgaccaaaatcaggaa 598
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tacacattgagccacctcatcattcctaaatttttttgttgctgtgaccaaaatcaggaa 797

                                            
Query: 599 gtagaactttctatactctaaattatgccaaga 631
            ||||||||||||||| ||||||||||||||||
Sbjct: 798 atagaactttctataccctaaattatgccaaga 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1030
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1020
Effective search space:   633420
Effective search space used:   633420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)