Query= MSMg01no080_g02.b1 MSMg01no080_g02.b1 CHROMAT_FILE:
MSMg01no080_g02.b1 PHD_FILE: MSMg01no080_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:16 2005
(361 letters)
>mm_chr1_99585572_99586333
Length = 762
Score = 685 bits (354), Expect = 0.0
Identities = 357/358 (99%), Gaps = 1/358 (0%)
Strand = Plus / Plus
Query: 5 gaattccagagaatccatttgcaagtaagtcacgtaaacttttactagataacagtggca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagagaatccatttgcaagtaagtcacgtaaacttttactagataacagtggca 264
Query: 65 tacagaaaggtaagctcaactacagagaaccaaacacacgtggacagaggagttgttcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacagaaaggtaagctcaactacagagaaccaaacacacgtggacagaggagttgttcat 324
Query: 125 attttcctttgtcttgaagtcttaataatgctatggttggttcccctatgtagtttcaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attttcctttgtcttgaagtcttaataatgctatggttggttcccctatgtagtttcaca 384
Query: 185 gaaaataagctttaaaaaaa-ttaaatatttcattactgtgtctgtttcccttgggtttc 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaaataagctttaaaaaaaattaaatatttcattactgtgtctgtttcccttgggtttc 444
Query: 244 cataacgaaataggagagtcgcttgtttaaacaacagcaattcattttctcgtgcttctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cataacgaaataggagagtcgcttgtttaaacaacagcaattcattttctcgtgcttctg 504
Query: 304 ggaatagaaattccaagctcaaggttacttctgaggtttctgtcctaacttcaaaacg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggaatagaaattccaagctcaaggttacttctgaggtttctgtcctaacttcaaaacg 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 762
Length adjustment: 9
Effective length of query: 352
Effective length of database: 753
Effective search space: 265056
Effective search space used: 265056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_g02.g1 MSMg01no080_g02.g1 CHROMAT_FILE:
MSMg01no080_g02.g1 PHD_FILE: MSMg01no080_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:16 2005
(461 letters)
>mm_chr1_99748798_99749657
Length = 860
Score = 853 bits (441), Expect = 0.0
Identities = 456/461 (98%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 1 atgactcatgttctgcattgtgaatgcaccagttctcttgtaatgtttctttgatcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atgactcatgttctgcattgtgaatgcaccagttctcttgtaatgtttctttgatcattt 601
Query: 61 ctccccttacatctatctctacaatttcaagaatgacagtgagatgcttgccttacgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctccccttacatctatctctacaatttcaagaatgacagtgagatgcttgccttacgttg 541
Query: 121 ccatatcattctaagtgtgatttttatgcagaccacatatgtcagttcaacagacaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ccatatcattctaagtgtgatttttatgcagaccacatatgtcagttcaacagacaatga 481
Query: 181 caataaaaagcggaggataaaccttgtgcatgttgcatcttatcctttacatctgaaaac 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caataaaaagcggaggagaaaccttgtgcatgttgcatcttatcctttacatctgaaaac 421
Query: 241 agaattggccacttaatcgcttggtgatactgcctccaatgtgtttctgagtatactcaa 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 420 agaattggccacttaatcgcttggcgatactgcctccaatgtgtttctgagtatactcaa 361
Query: 301 tggttggatttttttaagggtgtccccaaaatgcagtacatgttttgattctactaagag 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggttggatttttt-aagggtgtccccaaaatgcagtacatgttttgattctactaagag 302
Query: 361 atgaatatccactgagtagttccttaatcgcaaatctacacttgaaagcaaaattttaaa 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 atgaatatccactgagtagttccttaatcgcaaatctacacttgaaagtaaaattttaaa 242
Query: 421 tgcattttctacaaatcttaatgcctattttcctttcacat 461
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtattttctacaaatcttaatgcctattttcctttcacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 860
Length adjustment: 10
Effective length of query: 451
Effective length of database: 850
Effective search space: 383350
Effective search space used: 383350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
