Query= MSMg01no080_i06.b1 MSMg01no080_i06.b1 CHROMAT_FILE:
MSMg01no080_i06.b1 PHD_FILE: MSMg01no080_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:27 2005
(252 letters)
>mm_chr1_169552257_169552907
Length = 651
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%), Gaps = 1/232 (0%)
Strand = Plus / Minus
Query: 21 tttccctcttttccctccttttacatgaggttaagccagcctatctcggagcgcacaccc 80
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 451 tttccctcttttccctccttttacattaggttaagccagcctatct-ggagcgcacaccc 393
Query: 81 ggtattttatcctgcttctctgtagtatacagaggttctacacctaggaacttcaagaga 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggtattttatcctgcttctctgtagtatacagaggttctacacctaggaacttcaagaga 333
Query: 141 aaatggtgcccaggctggtgcctggcgcttctcgtatggcgggtctgaggacggctctta 200
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 332 aaatggtgcccaggctggtgcctggtgcttctcgtatggcgggtctgaggacggctctta 273
Query: 201 ctggggctttctgtcatttcatcaatgatacccatatacctttgcaggcaaa 252
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctggggctttctgtcatttcatcaatgatacccatatacctttgcaggcaaa 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 651
Length adjustment: 9
Effective length of query: 243
Effective length of database: 642
Effective search space: 156006
Effective search space used: 156006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no080_i06.g1 MSMg01no080_i06.g1 CHROMAT_FILE:
MSMg01no080_i06.g1 PHD_FILE: MSMg01no080_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:27 2005
(340 letters)
>mm_chr1_169375402_169376141
Length = 740
Score = 634 bits (328), Expect = 0.0
Identities = 337/340 (99%)
Strand = Plus / Plus
Query: 1 tcttaacccttggatttttcatctctctcctccagcatttgcttctgggacatagtagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaacccttggatttttcatctctctcctccagcatttgcttctgggacatagtagtt 260
Query: 61 aattacatgtttacttgctttaagggtgggccttcttgctacttcgatgaatccatcaag 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatacatgtttacttgctttaagggtgggccttcttgctacttcgatgaatccatcaag 320
Query: 121 ttttttggactttttattccattctactgagctcaaaacagcacacatgggctggtggag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttttggactttttatcccattctactgagctcaaaacagcacacatgggctggtggag 380
Query: 181 caggaagggaccaacctctgaaataaccaccaaatattttattttactagagggcttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggaagggaccaacctctgaaataaccaccaaatattttattttactagagggcttcag 440
Query: 241 tctccaagacagtgatggtaaaatgggaaggcaagagagaaatcagggagccagaccagg 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 tctccaagacagtgatggtaaaatgggagggcaagagagaaatcagggagccagaccagg 500
Query: 301 gaaggcacagtcggtggtgctctctgacagctagatcagt 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaggcacagtcggtggtgctctctgacagctagatcagt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
