Query= MSMg01no080_i15.b1 MSMg01no080_i15.b1 CHROMAT_FILE:
MSMg01no080_i15.b1 PHD_FILE: MSMg01no080_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:28 2005
(494 letters)
>mm_chr1_149240864_149241757
Length = 894
Score = 803 bits (415), Expect = 0.0
Identities = 440/453 (97%), Gaps = 8/453 (1%)
Strand = Plus / Minus
Query: 5 gaattcctggacttcgattttgcttagtgctgttacttttatgcctgctttcttcattca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaattcctggactttgattttgcttagtgctgttacttttatgcctgctttcttcattca 394
Query: 65 tatttggaataagggagtacttaacttgccctttgtgtgacagaaacccacaattaagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tatttggaataagggagtacttaacttgccctttgtgtgacagaaacccacaattaagag 334
Query: 125 acaggatattttaaacagttcttaagttttaatttttttaaagatggtaatattttaaac 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 333 acaggatattttaaacagttcttaagtttgaatttttttaaagatggtaatattttaaac 274
Query: 185 ttgggcctggttttatattgtaatattaatatgagttcttggagataaagaagttttgat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttgggcctggttttatattgtaatattaatatgagttcttggagataaagaagttttgat 214
Query: 245 ttaacatatatgtgtgtgtgtgt--------atgtgtgcatgtgtgtgaagttgactagt 296
||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 213 ttaacatatgtgtgtgtgtgtgtgtgtgtgtatgtgtgcatgtgtgtgaagttgactagt 154
Query: 297 tgttattttgattgtttgtttttataaacaatacaaactagtgtcactgaggaagaagaa 356
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tgttattttgattgtttatttttataaacaatacaaactagtgtcactgaggaagaagaa 94
Query: 357 acctcagctgacgagcagtctacacccgattggctcgtgatgacctatgtgtgtgatctt 416
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 acctcagctgaggagcagtctacacccgattggctcgtgatgacctatgtgtgtgatctt 34
Query: 417 cttgatgaatcattgacatggaggccctacacc 449
|||||||||||||||||||||||||||||||||
Sbjct: 33 cttgatgaatcattgacatggaggccctacacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_i15.g1 MSMg01no080_i15.g1 CHROMAT_FILE:
MSMg01no080_i15.g1 PHD_FILE: MSMg01no080_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:29 2005
(539 letters)
>mm_chr1_149093385_149094322
Length = 938
Score = 1019 bits (527), Expect = 0.0
Identities = 536/539 (99%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 1 tcctcattcatcctcaaaggcacctttcccttcacagccccacgagcagagaagttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctcattcatcctcaaaggcacctttcccttcacagccccacgagcagagaagttttta 260
Query: 61 tacagaaggagaattaatcatgtgtttgtcatagtgcacacaaaataagtcatttgatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacagaaggagaattaatcatgtgtttgtcatagtgcacacaaaataagtcatttgatac 320
Query: 121 aatcgagcaaactgctagctgttagttcactccaaaggagttcacaatacattaggcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcgagcaaactgctagctgttagttcactccaaaggagttcacaatacattaggcgtg 380
Query: 181 cacttctcaggaggcaggcatgattgatggcaaggtaaaatattttaattttcaatttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacttctcaggaggcaggcatgattgatggcaaggtaaaatattttaattttcaatttgc 440
Query: 241 acaaaacagccctccacttcaaaaccacattcgaatgaaattctgctgtaataggatggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaaaacagccctccacttcaaaaccacattcgaatgaaattctgctgtaataggatggc 500
Query: 301 atgtaatatgtttctatctagagattttttttggatccaatgctgcattattcaaggtca 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 atgtaatatgtttctatctagagattttttt-ggatccaatgctgcattattcaaggtca 559
Query: 361 gaggggtgacaacatgaagatagatgataatttatcataaacaattacaacttcagtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaggggtgacaacatgaagatagatgataatttatcataaacaattacaacttcagtgct 619
Query: 421 attttaacatatattttattatttcaagtcatttaatacttgacatcagttcttagctca 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 620 attttaacatatattttattatttcaagtcatttaatacttcacatcagttcttagctca 679
Query: 481 agtgtgactttttgaatcttatacatttttgctacaatcttaactgctaataacactga 539
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 680 agtgtgactttttgaatcttatatatttttgctacaatcttaactgctaataacactga 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 938
Length adjustment: 10
Effective length of query: 529
Effective length of database: 928
Effective search space: 490912
Effective search space used: 490912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|