Query= MSMg01no080_o08.b1 MSMg01no080_o08.b1 CHROMAT_FILE:
MSMg01no080_o08.b1 PHD_FILE: MSMg01no080_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:56 2005
(421 letters)
>mm_chr1_90101602_90102424
Length = 823
Score = 774 bits (400), Expect = 0.0
Identities = 415/420 (98%), Gaps = 4/420 (0%)
Strand = Plus / Plus
Query: 5 ggaattcggtaaag-acgg-agagaagg-tacagcccctcggcttctgcttccacgggtg 61
|||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcggtaaagga-ggtagagaagggtacagcccctcggcttctgcttccacgggtg 263
Query: 62 ctcctccgatccccaaaaaagttctcaagggggtctcccccgaagaagtcgaaggagaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcctccgatccccaaaaaagttctcaagggggtctcccccgaagaagtcgaaggagaaa 323
Query: 122 gggtcgtggcccccgaagaactccctgaagacctccgcggggtctcggaaggagaagacg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggtcgtggcccccgaagaactccctgaagacctccgcggggtctcggaaggagaagacg 383
Query: 182 tactggaaggcatcgtggaacgggctgcccgccgcgccgcctccgcccacctcgcccact 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tactggaaggcatcgtggaacgggctgcccgccgcgccgcctccgcccacctcgcccact 443
Query: 242 tcgccgcagcggtcgtacacctcgcgcttgcggacgtccgataagacctcgtaggcctgc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcgccgcagcggtcgtacacctcgcgcttgcggacgtccgataagacctcgtaggcctgc 503
Query: 302 gccacctgcttgaaccgcctctcggcctcctccttgtgctcggggttcttgtccggttgc 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 504 gccacctgcttgaaccgcctctcggcctcctccttgtgctcggggttcttgtccgggtgc 563
Query: 362 cacttgagcgcaagcttgcggtacgccttgcggatggcctcggctgaggcctgccgcggc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacttgagcgcaagcttgcggtacgccttgcggatggcctcggctgaggcctgccgcggc 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 823
Length adjustment: 9
Effective length of query: 412
Effective length of database: 814
Effective search space: 335368
Effective search space used: 335368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_o08.g1 MSMg01no080_o08.g1 CHROMAT_FILE:
MSMg01no080_o08.g1 PHD_FILE: MSMg01no080_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:56 2005
(210 letters)
>mm_chr1_90210296_90210905
Length = 610
Score = 375 bits (194), Expect = e-109
Identities = 206/210 (98%)
Strand = Plus / Minus
Query: 1 ttgacagcagcaggacaatgaagtcaataaaaatggcagaggctgcctgatgtgggccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttgacagcagcaggacaatgaagtcaataaaaatggcagaggctgcctgatgtgggccca 351
Query: 61 cccactgtgatgaccaccatgaataagactccactagacaaatgacatgggattatgtct 120
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cccactgcgatgaccaccgtgaataagactccactagacaaatgacatgggattatgtct 291
Query: 121 tgcaaggctgggggaagggtggtttttaatgaggatgatttcatgcaactcatgaaggtt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tgcaaggctggggggagggtggtttttaatgaggatgatttcatgcaactcatgaaggtt 231
Query: 181 gctcagcatgcttactctgcttctaaagca 210
|||||| |||||||||||||||||||||||
Sbjct: 230 gctcagtatgcttactctgcttctaaagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
