XXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAGATCCGCGGAATTCTATC
AGGCCTTCCAAGAAGATCAAATATGCATACTCTTCAAACTATTCCACAAA
GTATAACCAGACACAACACTACCCAATTTGTTCTATGAAGCCACAGTTAT
GCTGATACCAAAACCACACAAAGACCCAACAAAGAAAGAGAACGTCACAC
CAATTTCCCTTATGAATATCAATGTAAAACTCAATAAAATACTCATAAAC
TGAATCCAAGAACACATCAAAATGATCATTCACCATGAATGTAGGTTTCA
TCCCAGGGATGCAGGGATGGTTCCATATATGGTAATCCAACAATGTAATC
CACTACATAAACAAACTCAAAGAGAAAAACCACATGATCCTCTCATTAGA
TGCTGAAAAAGCAGTTGACAAAGTTCAACATCCCTTCTTGTTAAACGTGT
TGGGAAAGACCAGGAGTTCAAGGCCCATACCTAAACATAAAAGCAATATA
CATCAAACCAGTAGCCAACATCAAACTAAATGGAGAGAAACTTGAAGCAA
CCCCACTAAAATCAGGAACTAGAAAAGGCTGCCCACTCTCTCCCTATCCA
ATATAGTACTTAAGTTCTAGCTAGAGCAATTAGACAACAAAAGGAGGTCA
TAGGGATTCATATAGGAAAGGAAGAAGTAAAACTATCACTATTTGCAGAT
GACACGATAGTATACT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAGAATAAGTCTACAATGTGTGGCTATAAGACAAAA
ATACACGACCAATCATGTCCCTATGCATAAGCAATGGATTGATTTACAAA
CTATAATCTTCACAAGTAATAAGTAATAAATGTCTAGTCAAACTATGTAT
TTTTGAATTTAGCTAATTAGTTTCCTATAGAGCCAAGAGACTGGGTTTAC
GTTTCTCCCTATCTATAATAAATGAGTGATTTTTGTAGTGACTACATTGA
CCATCTGCTTCACCTTTATTGGAATAAACTTTAAAACACAGAGATATTTT
AAGCAACAAACAATGAATCTTATTTGCTAATTTTGTTAAAGATTATTATA
TGCAATAGAAACTCAGTTTGAATAACCCCAAATTGTTTAAGCCAGTAATA
TCAAGGAAGATAAGCAGATGGTAATGTGTACAACTCCTCTTTCCACATGA
GTTCTTTTCTAACAAAGAGGAAGGCACAGCAATTATTTATACCTATTACC
AGCCACAGAACTACTTGATGGCCAATAAGAGTTAAAATATAAATATGCTT
CTTGAAGTCTGTATGAGTATGTAAAATTGATCACACACTCAGAACTCCAG
CCCAAACACAGGCAACTTCAAAGAAAAGAAAGACTTTTACTAAAGCAAGA
CTCTGTAAGTAAAATA

Query= MSMg01no082_b21.g1 MSMg01no082_b21.g1 CHROMAT_FILE:
MSMg01no082_b21.g1 PHD_FILE: MSMg01no082_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:31 2005
         (607 letters)



>mm_chr1_46189153_46190159
          Length = 1007

 Score = 1120 bits (579), Expect = 0.0
 Identities = 600/607 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaataagtctacaatgtgtggctataagacaaaaatacacgaccaatcatgtccctatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 agaataagtctacaatgtgtggctataagacaaaaatacacgaccaatcatgtccctatg 748

                                                                       
Query: 61  cataagcaatggattgatttacaaactataatcttcacaagtaataagtaataaatgtct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 cataagcaatggattgatttacaaactataatcttcacaagtaataagtaataaatgtct 688

                                                                       
Query: 121 agtcaaactatgtatttttgaatttagctaattagtttcctatagagccaagagactggg 180
           |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 687 agtcaaactatgtatttttgaatttagctaatcagtttcctatagagcccagagactggg 628

                                                                       
Query: 181 tttacgtttctccctatctataataaatgagtgatttttgtagtgactacattgaccatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tttacgtttctccctatctataataaatgagtgatttttgtagtgactacattgaccatc 568

                                                                       
Query: 241 tgcttcacctttattggaataaactttaaaacacagagatattttaagcaacaaacaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 567 tgcttcacctttattggaataaactttaaaacacagagatattttaagcaacaaacaata 508

                                                                       
Query: 301 aatcttatttgctaattttgttaaagattattatatgcaatagaaactcagtttgaataa 360
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 507 aatcttatttgctaattttgttaaagattattatattcaatagaaactcagtttgaataa 448

                                                                       
Query: 361 ccccaaattgtttaagccagtaatatcaaggaagataagcagatggtaatgtgtacaact 420
           ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||
Sbjct: 447 ccccaaattgtttaagccagtaacatccaggaaaataagcagatggtaatgtgtacaact 388

                                                                       
Query: 421 cctctttccacatgagttcttttctaacaaagaggaaggcacagcaattatttataccta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cctctttccacatgagttcttttctaacaaagaggaaggcacagcaattatttataccta 328

                                                                       
Query: 481 ttaccagccacagaactacttgatggccaataagagttaaaatataaatatgcttcttga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttaccagccacagaactacttgatggccaataagagttaaaatataaatatgcttcttga 268

                                                                       
Query: 541 agtctgtatgagtatgtaaaattgatcacacactcagaactccagcccaaacacaggcaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agtctgtatgagtatgtaaaattgatcacacactcagaactccagcccaaacacaggcaa 208

                  
Query: 601 cttcaaa 607
           |||||||
Sbjct: 207 cttcaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)