Query= MSMg01no082_p11.b1 MSMg01no082_p11.b1 CHROMAT_FILE:
MSMg01no082_p11.b1 PHD_FILE: MSMg01no082_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:34 2005
(442 letters)
>mm_chr1_165033128_165033970
Length = 843
Score = 789 bits (408), Expect = 0.0
Identities = 432/446 (96%), Gaps = 10/446 (2%)
Strand = Plus / Minus
Query: 5 gaattcacccttgatccttaggctcaatagcactatccccccccccc----------ttg 54
|||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 510 gaattcacccttgatctttaggctcaatagcactatccccccccccccccccccccgttg 451
Query: 55 aaaatcaaaccattgcttcccagatatcagagcacaagaaaacaatagcctgggcacctg 114
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 450 aaaatcaaaccattgcttcccagatatcagagcacaagaaaacaataacctgggcacctg 391
Query: 115 tatcagacacattttgttgtataaaaaaaatcacatgaatatttgatgccttgaaacagc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatcagacacattttgttgtataaaaaaaatcacatgaatatttgatgccttgaaacagc 331
Query: 175 aaggatttagtctctctcagtatgggttgcctgggagatttttcaggtctgggttggaac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aaggatttagtctctctcagtatgggttgcctgggagatttttcaggtctgggttggaac 271
Query: 235 agccagtgtcaaagattacagtgatctacagaagaaaagaaaactttgcccctgtatctc 294
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agccagtgtcaaagactacagtgatctacagaagaaaagaaaactttgcccctgtatctc 211
Query: 295 aaacatttgctgaaatgaagtgaaaggatacagattaacaggggttgggtggggtgaggt 354
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 210 aaacatttgctgaaatgaagtgaaaggagacagattaacaggggttgggtggggtgaggt 151
Query: 355 gtatagtattattgtacactgacatgtcacaacacaactcatacacaaaatatgcaccct 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gtatagtattattgtacactgacatgtcacaacacaactcatacacaaaatatgcaccct 91
Query: 415 ctttaagtgctttaaattatagagaa 440
||||||||||||||||||||||||||
Sbjct: 90 ctttaagtgctttaaattatagagaa 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_p11.g1 MSMg01no082_p11.g1 CHROMAT_FILE:
MSMg01no082_p11.g1 PHD_FILE: MSMg01no082_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:34 2005
(594 letters)
>mm_chr1_164865862_164866855
Length = 994
Score = 1141 bits (590), Expect = 0.0
Identities = 593/594 (99%)
Strand = Plus / Plus
Query: 1 tttaaaaactcatttctagagttgaagataaaaatctatgactatatatttcatttaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaaaactcatttctagagttgaagataaaaatctatgactatatatttcatttaacg 260
Query: 61 ggaccaaaaactacagaagaatctcgtgagatgaatacagagctatcctaaattagtact 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaccaaaaactacagaagaatctcatgagatgaatacagagctatcctaaattagtact 320
Query: 121 aaattccctatcagggaaattttttttttcaggtgggcaaaaactgagaccaagatagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattccctatcagggaaattttttttttcaggtgggcaaaaactgagaccaagatagag 380
Query: 181 gatgatagttatctgatgagtgtcacggatacatttacatggaatcacattgattggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgatagttatctgatgagtgtcacggatacatttacatggaatcacattgattggaaa 440
Query: 241 attcaagacagggaagctggaactggctttggaaacttaagtgttatatttataacaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcaagacagggaagctggaactggctttggaaacttaagtgttatatttataacaaac 500
Query: 301 atttcgtgactatagtgtttcttaaagcttgatagcaaagattatatttttctcttcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttcgtgactatagtgtttcttaaagcttgatagcaaagattatatttttctcttcaga 560
Query: 361 tttagaattgacaatctaaaaaccacacattgttattagatgatttataataacttataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttagaattgacaatctaaaaaccacacattgttattagatgatttataataacttataa 620
Query: 421 ctgcccagagagacaaagttagtcattaaattatacccttctgcattgcaaggcacatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgcccagagagacaaagttagtcattaaattatacccttctgcattgcaaggcacatta 680
Query: 481 gaggcaacctaattttcaatctccctatttgacagatgagttcttgagctcgagtgtggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaggcaacctaattttcaatctccctatttgacagatgagttcttgagctcgagtgtggt 740
Query: 541 agtcagctgcctgagatctatctgcctagaaaacctgagttggaaactgacctc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtcagctgcctgagatctatctgcctagaaaacctgagttggaaactgacctc 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
