Query= MSMg01no083_c15.b1 MSMg01no083_c15.b1 CHROMAT_FILE:
MSMg01no083_c15.b1 PHD_FILE: MSMg01no083_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:49 2005
(536 letters)
>mm_chr1_94912841_94913776
Length = 936
Score = 982 bits (508), Expect = 0.0
Identities = 529/536 (98%)
Strand = Plus / Minus
Query: 1 aggtgccatatgggtagccaccctcatgcatggccaccctcatccccaggacttgagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aggtgccatatgggtagccaccctcatgcatggccaccctcatccccaggacttgagcta 677
Query: 61 atagtcattagcatcaagtgtcagggaaccctctccatgaagtatagaataagactcatt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 676 atagtcattagcatcaagtgccagggaaccctctccatgaagtatagaataagactcatt 617
Query: 121 cccaagaatccaaatcaaggtacccatcccagagcaagattaaactagaaaccaggtgac 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cccaagaatccaaatcaaggtgcccatcccagagcaagattaaactagaaaccaggtgac 557
Query: 181 ctgagctgtccgcggtggactgtggaggcaggaggttgagatacaaagtggagagaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 556 ctgagctgtccgcggtggactgtggaggcaggaggttgagatacaaagtggggagaagac 497
Query: 241 acctgttttaagaagctcactctggtgctcatgaccaggagggaaggagcgggttgcttc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 acctgtgttaagaagctcactctggtgctcatgaccaggagggaaggagcgggttgcttc 437
Query: 301 aatttcttggttcccaagggccacacagcccccagcaggcacaaaggcagtcatggcttg 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 436 aatttcttggttcccaagggccacacagcccccagcaggcagaaaggcagtcatggcttg 377
Query: 361 ccacactcgctcaggtcaaccagcctgaagctgaggccttgcaagagtccagctccaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccacactcgctcaggtcaaccagcctgaagctgaggccttgcaagagtccagctccaccc 317
Query: 421 aggaggtgggtgtctgaggccagccaacctacagagcacctgtgcctgggtcgggttata 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 316 aggaggtgggtgtctgaggccagccaacctccagagcacctgtgcctgggtcgggttata 257
Query: 481 gaaaggttgggagctctagtgcccaccccacccccattcaggggccattccatact 536
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 256 gaaaggttgggagctctagtgcccaccccacccccattcaggggccatgccatact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_c15.g1 MSMg01no083_c15.g1 CHROMAT_FILE:
MSMg01no083_c15.g1 PHD_FILE: MSMg01no083_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:49 2005
(497 letters)
>mm_chr1_94791999_94792892
Length = 894
Score = 930 bits (481), Expect = 0.0
Identities = 492/497 (98%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 1 actttgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcctccggagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 actttgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcctcccgagtgc 260
Query: 61 tgggattaaaggtgtgcgccaccacgcccggcacattctcatttttttatttagatcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaaggtgtgcgccaccacgcccggcacattctcatttttttatttagatcctt 320
Query: 121 attattgttagtattacagtcactaaaatgagaaagctacctctgttttaactttcccaa 180
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atta---ttagtattatagtcactaaaatgagaaagctacctctgttttaactttcccaa 377
Query: 181 agcctgaatatctttttctctagtgtcctagataatagctgcacccactcctcacctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agcctgaatatctttttctctagtgtcctagataatagctgcacccactcctcacctaaa 437
Query: 241 cacacagaggcccctccagacatacacacactgtggtactatcctcccatgagcacacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cacacagaggcccctccagacatacacacactgtggtactatcctcccatgagcacacag 497
Query: 301 cgccccactcctcatatatgtgttcacacagcagcctctcccctcatataaacacatggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cgccccactcctcatatatgtgttcacacagcagcctctcccctcatataaacacatggc 557
Query: 361 aaccctgcccctcgagtgaacacacagcagccagaccctcgtgaacacatgggcagtccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaccctgcccctcgagtgaacacacagcagccagaccctcgtgaacacatgggcagtccc 617
Query: 421 gcctatcatgtgatcacggcatctcctcacctggaataacattgtttttgtgtgcatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcctatcatgtgatcacggcatctcctcacctggaataacattgtttttgtgtgcatggt 677
Query: 481 cccgtagccttctcgtt 497
|||||||||||||||||
Sbjct: 678 cccgtagccttctcgtt 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 894
Length adjustment: 10
Effective length of query: 487
Effective length of database: 884
Effective search space: 430508
Effective search space used: 430508
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
