Query= MSMg01no083_d23.b1 MSMg01no083_d23.b1 CHROMAT_FILE:
MSMg01no083_d23.b1 PHD_FILE: MSMg01no083_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:55 2005
(341 letters)
>mm_chr1_32453694_32454433
Length = 740
Score = 580 bits (300), Expect = e-170
Identities = 327/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 6 aattcacctctttatcatctgacagtggcttagttaccatttttatcatctatcgtctct 65
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 540 aattcacctctttatcatctgacagtggcttagttaccagttttatcatctatcgtctct 481
Query: 66 ttaccagacaccattttcaaccacaagacaattatcaccttactctgaagtaattatcct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttaccagacaccattttcaaccacaagacaattatcaccttactctgaagtaattatcct 421
Query: 126 cgttcaagtcattattgagctttgctcttgcaagggtcagatcagatctaattatctgga 185
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 420 tgttcaagtcattattgagctttgctcttgcaagggtcagatcagatataattatctgga 361
Query: 186 caccagagagagccagcaatgcttaaaattattgctcctcagcgtcctaagtagaccatt 245
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 360 taccagagagagccagcaatgcttaaaattattgctcctcagggtcctaagtagaccatc 301
Query: 246 tcctaaaatgattattatgccatgcatgttcggtaatgtcttatcaatatcagttattgg 305
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 300 tcctaaaatgat-attatgccatgcatgtttggtaatgtcttatcaatatcagttattgg 242
Query: 306 ggaggaagggactcaggaatcagagctaggaggaca 341
|||| |||||||||||||||||||||||||||||||
Sbjct: 241 ggagaaagggactcaggaatcagagctaggaggaca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 740
Length adjustment: 9
Effective length of query: 332
Effective length of database: 731
Effective search space: 242692
Effective search space used: 242692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_d23.g1 MSMg01no083_d23.g1 CHROMAT_FILE:
MSMg01no083_d23.g1 PHD_FILE: MSMg01no083_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:55 2005
(640 letters)
>mm_chr1_32332950_32333989
Length = 1040
Score = 1214 bits (628), Expect = 0.0
Identities = 637/640 (99%)
Strand = Plus / Plus
Query: 1 ctaggtagaagagaagtttaggaagagaacagagcttcaaggtgagcctgctgtagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaggtagaagagaagtttaggaagagaacagagcttcaaggtgagcctgctgtagggag 260
Query: 61 atgcaggtatatactaagacacctctgcataacagctctttaaggcctaacagaaatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcaggtatatactaagacacctctgcataacagctctttaaggcctaacagaaatttc 320
Query: 121 tgttgtttttatctttactttttcttttctcatcttggtcttatttctatgactatgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgtttttatctttactttttcttttctcatcttggtcttatttctatgactatgatg 380
Query: 181 gaacctgtgcatgcttcgatgatgctgtcacataatacctactgttttaagccattgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gaacctgtgcatgcttcgatgatgctgtcacataatacctactgttttaaggcattgtgc 440
Query: 241 ttgtctccaagactcataaacttcttgaccttaaaatggattcattttttaatattagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtctccaagactcataaacttcttgaccttaaaatggattcattttttaatattagat 500
Query: 301 attttcttcatttacatttcaaatgctatcccctttcctagtttcctcaccaaaaatccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attttcttcatttacatttcaaatgctatcccctttcctagtttcctcaccaaaaatccc 560
Query: 361 catcccctctccccactctgctccccaacccacccactcctacttcctggccctggcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcccctctccccactctgctccccaacccacccactcctacttcctggccctggcatt 620
Query: 421 cctctatactggggcatagaatctttgcaggaccaccaaagaattagcatgtagcatagt 480
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 cctctatactggggcatagaatctttgcaggaccaccaaagtcttagcatgtagcatagt 680
Query: 481 tccacacaaagaagcattagtgaacaaataaacaattggtagttagtgtttgagtaataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccacacaaagaagcattagtgaacaaataaacaattggtagttagtgtttgagtaataa 740
Query: 541 gtcttgttccctttattgataaatactcaaaattatgccttatggccagaaaaaagtcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtcttgttccctttattgataaatactcaaaattatgccttatggccagaaaaaagtcat 800
Query: 601 tgataataatgaaagtgtgagttttattttttctattgga 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgataataatgaaagtgtgagttttattttttctattgga 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
