Query= MSMg01no084_b20.b1 MSMg01no084_b20.b1 CHROMAT_FILE:
MSMg01no084_b20.b1 PHD_FILE: MSMg01no084_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:03 2005
(412 letters)
>mm_chr1_72044833_72045644
Length = 812
Score = 702 bits (363), Expect = 0.0
Identities = 399/413 (96%), Gaps = 6/413 (1%)
Strand = Plus / Plus
Query: 3 gaattcttccccatctgccagggaccgtccatgtgatatttccttcctttgcttttgcta 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcttccccatctgtcagggaccgtccatgtgatatttccttcctttgcttttgcta 262
Query: 63 atcgattaactagagatcgaaggtatttcccccaagaaataaaagtaacactgctacatg 122
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 263 atcgattaactagagatcgaaggtacttcccccaagaaataaaagtaacactgctacaag 322
Query: 123 caacccagagaagctgggcagaggcttggagg---aggtgagcatcaccataggccggtc 179
|||||||||||||||||||||||| || ||| |||||||||||||||||||| ||||
Sbjct: 323 caacccagagaagctgggcagagg-tt--aggcgcaggtgagcatcaccataggctggtc 379
Query: 180 accatgtcgcagttagcccagagtaaggtgtcaggatgctttattgtgcctaggacaaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 accatgtcgcagttagcccagagtaaggtgtcaggatgctttattgtgcctaggacaaga 439
Query: 240 aagaaaactggaaaacaataatgtgagaaattgaattgatatttttgtagatgtctgttg 299
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 440 aagaaaactggaaaacaataatgtgagaaattgaattgaaatttttgtagacgtctgttg 499
Query: 300 aacacaataggaaactaattccttattacggtagtttctaaagtcctaactagaaaaaga 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacacaaaaggaaactaattccttattacggtagtttctaaagtcctaactagaaaaaga 559
Query: 360 ctaatcctgtgccaaggatgcccaaaacccttcctgtcaacccatacctcaat 412
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 560 ctaatcctgtgccaaggatgcccaaaacccttcctgtcaacccacacctcaat 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_b20.g1 MSMg01no084_b20.g1 CHROMAT_FILE:
MSMg01no084_b20.g1 PHD_FILE: MSMg01no084_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:03 2005
(438 letters)
>mm_chr1_72168013_72168850
Length = 838
Score = 839 bits (434), Expect = 0.0
Identities = 437/438 (99%)
Strand = Plus / Minus
Query: 1 aacatccaccgcgggcagatctatctgtggagtttaaggcgcaccctgacattctgcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aacatccaccgcgggcagatctatctgtggagtttaaggcgcaccctgacattctgcaca 579
Query: 61 tgctccgtttgtcccagttgccttgcgcggatatactttcctcgcgatgtctgttctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgctccgtttgtcccagttgccttgcgcggatatactttcctcgcgatgtctgttctctg 519
Query: 121 agctctgaaaatgtatcctttaatctcgggctcagaaaaccccttgactgtggaaggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 agctctgaaaatgtatcctttaatctcgggctcagaaaaccccttgactgtggaaggaga 459
Query: 181 caccaaaggccttccagtgacaggcagggagagggcggtttggattactaatttgctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 caccaaaggccttccagtgacaggcagggagagggcggtttggattactaatttgctttc 399
Query: 241 acttcttagcctgtttttccttcccagggctgttcctctgtagaccttgagtatgaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 acttcttagcctgtttttccttcccagggctgttcctctgtagaccttgagtatgaataa 339
Query: 301 ttccgggtagcctgaggggagaagcaggaggccgccttgtaggcctgtttgtactgtaat 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 338 ttccgggtagcctgaggggagaagcaggaggccgccttgtagggctgtttgtactgtaat 279
Query: 361 gaaatagaaagtttaaaagcctaagtgaagcctgtgcgtttggaaatggcgggaggtcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gaaatagaaagtttaaaagcctaagtgaagcctgtgcgtttggaaatggcgggaggtcca 219
Query: 421 gcatgcgctttaaaaatt 438
||||||||||||||||||
Sbjct: 218 gcatgcgctttaaaaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
