Query= MSMg01no084_o23.b1 MSMg01no084_o23.b1 CHROMAT_FILE:
MSMg01no084_o23.b1 PHD_FILE: MSMg01no084_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:06 2005
(199 letters)
>mm_chr1_167016395_167016993
Length = 599
Score = 337 bits (174), Expect = 4e-97
Identities = 192/198 (96%), Gaps = 2/198 (1%)
Strand = Plus / Minus
Query: 1 aattcggcattctcgcttcatgtcttttgtctttgtcatcgttccctccttccttggact 60
||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 397 aattcggcattctcgtttcatgtcttttgtctttgtcatctttccctccctccttggact 338
Query: 61 gctgctttagctgtgagttctaatatgtggctctctgctgtcagcaaagatcatgtctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctgctttagctgtgagttctaatatgtggctctctgctgtcagcaaagatcatgtctca 278
Query: 121 gcctctggcctcagcagtgcctgcaaattagcagacttacatgtaataactaaaagaata 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gcctctgacctcagcagtgcctgcaaattagcagacttacatgtaataactaaaagaata 218
Query: 181 a-tcaatgggtagccagg 197
| | ||||||||||||||
Sbjct: 217 agt-aatgggtagccagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no084_o23.g1 MSMg01no084_o23.g1 CHROMAT_FILE:
MSMg01no084_o23.g1 PHD_FILE: MSMg01no084_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:06 2005
(366 letters)
>mm_chr1_166870222_166870985
Length = 764
Score = 611 bits (316), Expect = e-179
Identities = 356/372 (95%), Gaps = 8/372 (2%)
Strand = Plus / Plus
Query: 1 acggagactgagggggcatgcacagggcctgcgcaggtctgcatcatgtcttctgc-taa 59
||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||
Sbjct: 195 acggagactgaggaggcatgcacagggcctgtgcaggtctacatcatgtcttctgcataa 254
Query: 60 tattatggcttctagcttagcatttctctggggttcctgaatgtgtgaattctctaatcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tattatggcttctagcttagcatttctctggggttcctgaatgtgtgaattctctaatcc 314
Query: 120 ttgtgcttttctcttgggttactttccttctgtttgtttgtcttgtcctagtccaatgtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttgtgcttttctcttgggttactttccttctgtttgtttgtcttgtcctagtccaatgtg 374
Query: 180 ttagatttgttttaccttattttatt-----attatcccttcaaaaaaataaaatcaatt 234
||| | |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 375 ttaaacttgttttaccttattttattttattattatcccttcaaaaaa-taaaatcaatt 433
Query: 235 tatatattctgactttatcatatgaaacttgggctttatgtttaagtataatagtgttta 294
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 434 tatatattctgacattatcatatgaaactcgggctttatgtttaagtataatagtgttta 493
Query: 295 attcacacccctgctgtaatcagatataaaaaggatctgattctctaatccttaccaata 354
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 494 attcacacccctgctgtaattagatataaaa-ggatctgattctctaatccttaccaata 552
Query: 355 caggatttcaat 366
||||||||||||
Sbjct: 553 caggatttcaat 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 764
Length adjustment: 9
Effective length of query: 357
Effective length of database: 755
Effective search space: 269535
Effective search space used: 269535
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
