Query= MSMg01no087_p03.b1 MSMg01no087_p03.b1 CHROMAT_FILE:
MSMg01no087_p03.b1 PHD_FILE: MSMg01no087_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:15 2005
(599 letters)
>mm_chr1_32453436_32454433
Length = 998
Score = 1040 bits (538), Expect = 0.0
Identities = 580/594 (97%), Gaps = 1/594 (0%)
Strand = Plus / Minus
Query: 6 aattcacctctttatcatctgacagtggcttagttaccatttttatcatctatcgtctct 65
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 798 aattcacctctttatcatctgacagtggcttagttaccagttttatcatctatcgtctct 739
Query: 66 ttaccagacaccattttcaaccacaagacaattatcaccttactctgaagtaattatcct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ttaccagacaccattttcaaccacaagacaattatcaccttactctgaagtaattatcct 679
Query: 126 cgttcaagtcattattgagctttgctcttgcaagggtcagatcagatctaattatctgga 185
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 678 tgttcaagtcattattgagctttgctcttgcaagggtcagatcagatataattatctgga 619
Query: 186 caccagagagagccagcaatgcttaaaattattgctcctcagcgtcctaagtagaccatt 245
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 618 taccagagagagccagcaatgcttaaaattattgctcctcagggtcctaagtagaccatc 559
Query: 246 tcctaaaatgattattatgccatgcatgttcggtaatgtcttatcaatatcagttattgg 305
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 558 tcctaaaatga-tattatgccatgcatgtttggtaatgtcttatcaatatcagttattgg 500
Query: 306 ggaggaagggactcaggaatcagagctaggaggacaagcatcagggaaaggagccagtgg 365
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 499 ggagaaagggactcaggaatcagagctaggaggacaatcatcagggaaaggagccagtgg 440
Query: 366 tggtgggttgcatctgagagtttgctaccaggatggattggatggtctcagttgttagag 425
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tggtgggttgcatttgagagtttgctaccaggatggattggatggtctcagttgttagag 380
Query: 426 aatcagtaacctggaaagaaatgtcaaaaccacaggtagacagaaactgatatggagagt 485
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 379 aatcagtaacctggaaggaaatgtgaaaaccacaggtagacagaaactgatatggagagt 320
Query: 486 cccgaggcacatgggggcaaggaaaatgctgaaaaaggcctgaaaataccctaaggctga 545
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cctgaggcacatgggggcaaggaaaatgctgaaaaaggcctgaaaataccctaaggctga 260
Query: 546 gctgcagatggcagcaggaaaagagtggaggaaggtgacctgatcagaataccc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gctgcagatggcagcaggaaaagagtggaggaaggtgacctgatcagaataccc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 998
Length adjustment: 10
Effective length of query: 589
Effective length of database: 988
Effective search space: 581932
Effective search space used: 581932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_p03.g1 MSMg01no087_p03.g1 CHROMAT_FILE:
MSMg01no087_p03.g1 PHD_FILE: MSMg01no087_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:15 2005
(467 letters)
>mm_chr1_32332950_32333816
Length = 867
Score = 853 bits (441), Expect = 0.0
Identities = 456/461 (98%)
Strand = Plus / Plus
Query: 1 ctaggtagaagagaagtttaggaagagaacagagcttcaaggtgagcccgctgtagggag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ctaggtagaagagaagtttaggaagagaacagagcttcaaggtgagcctgctgtagggag 260
Query: 61 atgcaggtatatactaagacacctctgcataacagctctttaaggcctaacagaaatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcaggtatatactaagacacctctgcataacagctctttaaggcctaacagaaatttc 320
Query: 121 tgttgtttttatctttactttttcttttctcatcttggtcttatttctatgactatgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgtttttatctttactttttcttttctcatcttggtcttatttctatgactatgatg 380
Query: 181 gaacctgtgcatgcttcgatgatgctgtcacataatacctactgttttaagccattgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gaacctgtgcatgcttcgatgatgctgtcacataatacctactgttttaaggcattgtgc 440
Query: 241 ttgtctccaagactcataaacttcttgaccttaaaatggattcattttttaatattagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtctccaagactcataaacttcttgaccttaaaatggattcattttttaatattagat 500
Query: 301 attttcttcatttacatttcaaatgctatcccctttcctagtttcctcaccaaaaatccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attttcttcatttacatttcaaatgctatcccctttcctagtttcctcaccaaaaatccc 560
Query: 361 catcccctctccccactctgctccccaatccacccactcctacttcctggccctggtatt 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 561 catcccctctccccactctgctccccaacccacccactcctacttcctggccctggcatt 620
Query: 421 cctctatactggggcatagaatctttgcgggaccaccaaag 461
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 cctctatactggggcatagaatctttgcaggaccaccaaag 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
