Query= MSMg01no088_g04.b1 MSMg01no088_g04.b1 CHROMAT_FILE:
MSMg01no088_g04.b1 PHD_FILE: MSMg01no088_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:50 2005
(231 letters)
>mm_chr1_84594370_84595000
Length = 631
Score = 416 bits (215), Expect = e-121
Identities = 227/231 (98%)
Strand = Plus / Plus
Query: 1 agctgacatcaggcttggacggagctagctgtccacaggaatgcccgctgagagagctgt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctgacatcagacttggacggagctagctgtccacaggaatgcccgctgagagagctgt 260
Query: 61 ccctctgaaggttactgcggatccagaactgagtgaaacattctagatttgttgtccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctctgaaggttactgcggatccagaactgagtgaaacattctagatttgttgtccttt 320
Query: 121 gtccttggccagaatggtcagaatatggatgccaccagtttaaccttgaccaatatctgc 180
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccttggccagagtggccagaatatggatgccaccagtttaaccttgaccaatatctgc 380
Query: 181 catttgccaatgttaaaccagttctttgttcctcagtccttacctttaggc 231
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttgcaaatgttaaaccagttctttgttcctcagtccttacctttaggc 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no088_g04.g1 MSMg01no088_g04.g1 CHROMAT_FILE:
MSMg01no088_g04.g1 PHD_FILE: MSMg01no088_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:50 2005
(507 letters)
>mm_chr1_84741962_84742869
Length = 908
Score = 816 bits (422), Expect = 0.0
Identities = 428/430 (99%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 1 aaagctagactgggctatttaaactaaaaaa-ataaaccaaacccaaaaaagcctgaggc 59
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 430 aaagctagactgggctatttaaactaaaaaacataaaccaaacccaaaaaagcctgaggc 371
Query: 60 tttccattttgtctaagttcatatgaattatgcttgcttaatatttacatgctccttgga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tttccattttgtctaagttcatatgaattatgcttgcttaatatttacatgctccttgga 311
Query: 120 gttgtctaaaataactacatgttaagtttgacagtatctgacttgttaaaaccttttacc 179
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 310 gttgtctaaaataactacatgttaagtttgacagtatctgacttgttagaaccttttacc 251
Query: 180 aggaagaaatatttaaaagtatgacatttgttcaaaagtatgtagcaaagtaaatttgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aggaagaaatatttaaaagtatgacatttgttcaaaagtatgtagcaaagtaaatttgaa 191
Query: 240 taattactttttatattactaaattatgtttttatttttataagccaaaaaatagaggat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 taattactttttatattactaaattatgtttttatttttataagccaaaaaatagaggat 131
Query: 300 tcttccccccattggtctttgaatagaatttagtagggaaggataaaatactgcagaggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tcttccccccattggtctttgaatagaatttagtagggaaggataaaatactgcagaggt 71
Query: 360 gagtgtgcccagatagttgaagagttcttatttccagaggaataatccagtaggtacagc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gagtgtgcccagatagttgaagagttcttatttccagaggaataatccagtaggtacagc 11
Query: 420 atttcattga 429
||||||||||
Sbjct: 10 atttcattga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 908
Length adjustment: 10
Effective length of query: 497
Effective length of database: 898
Effective search space: 446306
Effective search space used: 446306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
