Query= MSMg01no088_h08.b1 MSMg01no088_h08.b1 CHROMAT_FILE:
MSMg01no088_h08.b1 PHD_FILE: MSMg01no088_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:56 2005
(448 letters)
>mm_chr1_64717947_64718797
Length = 851
Score = 785 bits (406), Expect = 0.0
Identities = 434/444 (97%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 8 gaattctactatcact--ca-tggccttaaaggagccatgacaacaaaaacagcaattga 64
|||||||||||||||| || | ||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctactatcacttacagttgccttaaaggagccatgacaacaaaaacagcaattgg 267
Query: 65 aagtttttctgggtaaaattttcaccaagcatgtttactagttggatgcaaagatgatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aagtttttctgggtaaaattttcaccaagcatgtttactagttggatgcaaagatgatag 327
Query: 125 gatgctggtttagcacactggatggacataatatgcctgtactcaaccagtaaggaaaat 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 328 gatgctggtttagcacactggatggacagaatatgcctgtactcaaccagtaaggaaaat 387
Query: 185 caatgaccacattcacagacttgcttccaattctaattctggatttgacgaaactttgta 244
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 388 caatgaccacattcacagacttgcttccaattctaattctggatttgaggaaacgttgta 447
Query: 245 cctgcatttgaaaattgtattgaactactaaaatgttcaatgaatcaatgaatacatacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cctgcatttgaaaattgtattgaactactaaaatgttcaatgaatcaatgaatacatacc 507
Query: 305 taagacagcatctcctccaacatcagctctttattccattttaaactaagcatctgtgtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 taagacagcatctcctccaacatcagctctttattccattttaaactaagcatctgtgtg 567
Query: 365 atcaaataaactgaacgtacacttgagcagacattccctcaacacctaaccccgaaaagg 424
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 568 atcaaataaactgaacgtacacttgagcagactttccctcaacacttaaccccgaaaagg 627
Query: 425 ctaaattacattgaacctgcatcc 448
||||||||||||||||||||||||
Sbjct: 628 ctaaattacattgaacctgcatcc 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 851
Length adjustment: 10
Effective length of query: 438
Effective length of database: 841
Effective search space: 368358
Effective search space used: 368358
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_h08.g1 MSMg01no088_h08.g1 CHROMAT_FILE:
MSMg01no088_h08.g1 PHD_FILE: MSMg01no088_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:56 2005
(209 letters)
>mm_chr1_64819725_64820333
Length = 609
Score = 373 bits (193), Expect = e-108
Identities = 205/209 (98%)
Strand = Plus / Minus
Query: 1 aagccacttacgctgtttgctcaaatcaagacccttcttttgaggtggagcgggggatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 409 aagccacttacgctgtttgctcaaatcaagacccttcttttgaggtggagcaggggatta 350
Query: 61 ctccttctaatggtctgcaaacaggttctcaactgttaacccttccagcctctggggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctccttctaatggtctgcaaacaggttctcaactgttaacccttccagcctctggggaca 290
Query: 121 tggaacaaatgagccaagtcactgactagaagcaatcttaagtaccaggcactcaaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tggaacaaatgagccaagtcactgactagaagcaatcttaagtaccaggcactcaaactc 230
Query: 181 agctttgagacctcttggaagaatggggt 209
|| | ||||||||| ||||||||||||||
Sbjct: 229 aggtctgagacctcctggaagaatggggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space: 120000
Effective search space used: 120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
