GAGGATCCGCGGAATTCTCCTACCCTGCTCCCCCCCTAACCTTCGCCACA
TGCTCAACATTCACTCTGGACTATGTTTGCAAACCCAGCTCTTCAAGTCA
GTACCTAAACTCTGTTCTTATGCTTGTTCATCAAACCTTTTCCTGACTGA
ACTATCAACCTGGTCCTCTTGCCTCCTATTTTTAATGTTTCCTGAAAAAA
TAGGACAGCAGTTTAATCTTTAGCCAAAAGTTGAATCAACATTAAATTAT
TAAAATAAAATGTTCACTAATGAATGCTATGGTTTATCTTTCTTCACGAC
ACGTACTTGTGTTTTTCTGTATCTCCATATCCCCTACACCTTACTCTAAT
GCATATTCCTATGTCTGTGCCTTTTCAGCCATGTGCCACACTTTTATCCT
CAATGATTAACATTTGGAGTATTGAATGATCACCCCCCAACAGTCGATTA
CTTATCATACATCCTTTATCATTTGCCAGATTCTAAAGTACATACCGTTT
TTCTCTCTCCTACTTAACCTTGTTCACCTTATGCTCTTTATATCCCCCCT
GCCTCCTTTTTTTTTTCCCCTTTTCTTCCCTATTTCCCCTTTATCTCCAC
TTATTCCCTTATCATTCCCCCCTTACCACTTCATTTTTTATTTTTTATCC
ACACTTAACCACATCCTTTTTTTTCCCCCCTCCCCCTTTG

GGCGGCCGCCTGTTCCCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXAGTGACATCACTTTTAGTAAAAGAGACTACTTTGAAAAGGAAAGGCTC
GAGATAATATGATGCTGACTTTCCTTCCTGTGATGTTTTAAATTTATTTT
AGTGATGCGTAGACAGTATGATTATTGTTAATGTACAGAGACAATGGGAA
ATGCTTAACATAATATACGAAATCACAATATTGTGCCCTCATTTTGTATT
ACAGATAAAATCATTAAAACTTCATTGAAAAATAGGCTTAAAATTTAAGG
TAATCGTCTGCCAGTAGGACTATTTATATTTGGTAAAATTCATTCACAAA
CAATTCATCCAGAATTTAAAAAGTACATTCATTAGAATTAACTTTAAACT
TTCTTGTTAGTGTTAAGTTAGCGTTGTCTCCTTTATAGTAGTAGAGTTGA
GTAAGAAATATAAATATTAATGCAGAAACTTACAAACACACACACATATA
TACATACATATATATATGTATATATATATATTAATGATTGCTATACCAAA
ATACAAATATTATAGAAATTATTTACATGAGACAAAAGTACTGCTGAATT
TGCAGTAACATTTGGTGCACAGGATGTACTGTGTTAATAGCTGGGGCCAT
ACTATTTACGGCAAACCTGATCTCAGC

Query= MSMg01no089_g03.b1 MSMg01no089_g03.b1 CHROMAT_FILE:
MSMg01no089_g03.b1 PHD_FILE: MSMg01no089_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:10 2005
         (196 letters)



>mm_chr1_68477193_68477788
          Length = 596

 Score =  352 bits (182), Expect = e-102
 Identities = 188/190 (98%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctcctaccctgctccccccctaaccttcgccacatgctcaacattcactctggac 66
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctcctaccctgatccccccctaaccttcgccacatgctcaacattcactctggac 266

                                                                       
Query: 67  tatgtttgcaaacccagctcttcaagtcagtacctaaactctgttcttatgcttgttcat 126
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tatgtttgcaaacctagctcttcaagtcagtacctaaactctgttcttatgcttgttcat 326

                                                                       
Query: 127 caaaccttttcctgactgaactatcaacctggtcctcttgcctcctatttttaatgtttc 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 caaaccttttcctgactgaactatcaacctggtcctcttgcctcctatttttaatgtttc 386

                     
Query: 187 ctgaaaaaat 196
           ||||||||||
Sbjct: 387 ctgaaaaaat 396


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space:   110544
Effective search space used:   110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no089_g03.g1 MSMg01no089_g03.g1 CHROMAT_FILE:
MSMg01no089_g03.g1 PHD_FILE: MSMg01no089_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:10 2005
         (497 letters)



>mm_chr1_68558291_68559187
          Length = 897

 Score =  940 bits (486), Expect = 0.0
 Identities = 492/494 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgacatcacttttagtaaaagagactactttgaaaaggaaaggctcgagataatatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 643 agtgacatcacttttagtaaaagagactactttgaaaaggaaaggcttgagataatatga 584

                                                                       
Query: 61  tgctgactttccttcctgtgatgttttaaatttattttagtgatgcgtagacagtatgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tgctgactttccttcctgtgatgttttaaatttattttagtgatgcgtagacagtatgat 524

                                                                       
Query: 121 tattgttaatgtacagagacaatgggaaatgcttaacataatatacgaaatcacaatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tattgttaatgtacagagacaatgggaaatgcttaacataatatacgaaatcacaatatt 464

                                                                       
Query: 181 gtgccctcattttgtattacagataaaatcattaaaacttcattgaaaaataggcttaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gtgccctcattttgtattacagataaaatcattaaaacttcattgaaaaataggcttaaa 404

                                                                       
Query: 241 atttaaggtaatcgtctgccagtaggactatttatatttggtaaaattcattcacaaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atttaaggtaatcgtctgccagtaggactatttatatttggtaaaattcattcacaaaca 344

                                                                       
Query: 301 attcatccagaatttaaaaagtacattcattagaattaactttaaactttcttgttagtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 attcatccagaatttaaaaagtacattcattagaattaactttaaactttcttgttagtg 284

                                                                       
Query: 361 ttaagttagcgttgtctcctttatagtagtagagttgagtaagaaatataaatattaatg 420
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttaagttagtgttgtctcctttatagtagtagagttgagtaagaaatataaatattaatg 224

                                                                       
Query: 421 cagaaacttacaaacacacacacatatatacatacatatatatatgtatatatatatatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cagaaacttacaaacacacacacatatatacatacatatatatatgtatatatatatatt 164

                         
Query: 481 aatgattgctatac 494
           ||||||||||||||
Sbjct: 163 aatgattgctatac 150


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space:   431969
Effective search space used:   431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)