Query= MSMg01no090_g14.b1 MSMg01no090_g14.b1 CHROMAT_FILE:
MSMg01no090_g14.b1 PHD_FILE: MSMg01no090_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:34 2005
(191 letters)
>mm_chr1_38614795_38615386
Length = 592
Score = 335 bits (173), Expect = 1e-96
Identities = 185/189 (97%), Gaps = 1/189 (0%)
Strand = Plus / Minus
Query: 4 ggggctgccatcactgccccatgcttctttac-tatagtgtgccctgtaacatcacacgt 62
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 392 ggggctgccatcactgccccatgcttctttacatatagtgtgccctgtaacatcacacgt 333
Query: 63 gcaggtagcttccatatgtaccaagtaccttgactttgaaggcaattcagcataacaggg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 332 gcaggtagcttccatatgtaccaagtaccttgactttgaaggcaattcagcataacaagg 273
Query: 123 caggcatcaaagcatcatttacttagttttcaaaatctggaaagctgtaccctaagaacc 182
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 272 caggcatcaaagcatcatttacttagttttcaaaatctgggaagctgtaccctaagagcc 213
Query: 183 caagtgcta 191
|||||||||
Sbjct: 212 caagtgcta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 592
Length adjustment: 8
Effective length of query: 183
Effective length of database: 584
Effective search space: 106872
Effective search space used: 106872
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_g14.g1 MSMg01no090_g14.g1 CHROMAT_FILE:
MSMg01no090_g14.g1 PHD_FILE: MSMg01no090_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:34 2005
(192 letters)
>mm_chr1_38509507_38510098
Length = 592
Score = 325 bits (168), Expect = 1e-93
Identities = 186/192 (96%)
Strand = Plus / Plus
Query: 1 ttgtcaccccatattcaatctcttcctgattccacccacattttcagatccttttttaaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 201 ttgtcaccccatattcaatctcttcctgattacacccacattttcagatttttttttaaa 260
Query: 61 gctgactgtccatttctccacattgcttaaatatctgcttgggtataatattttgtctat 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 gctgactctccatttctccacattgcttaaatatctgcttgggtataatattttgcctat 320
Query: 121 ctgacataccggtcctttactaactgttcgtaccaagtcctacatgtggcagccattgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ctgacataccggtcctttactaactgttcgtaccaagtcctacatgtggcagccattaat 380
Query: 181 gttgctcatcaa 192
||||||||||||
Sbjct: 381 gttgctcatcaa 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
