Query= MSMg01no091_a17.b1 MSMg01no091_a17.b1 CHROMAT_FILE:
MSMg01no091_a17.b1 PHD_FILE: MSMg01no091_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:24 2005
(320 letters)
>mm_chr1_102782002_102782721
Length = 720
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%)
Strand = Plus / Minus
Query: 9 attctcatggatacttctgaactaataattgttctgcaaattctttttctaacatatttg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 attctcatggatacttctgaactaataattgttctgcaaattctttttctaacatatttg 459
Query: 69 ttctttgtattcccctcctgggaataataagaacttttgttttatggaaattggcactac 128
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttctttgtattttcctcctgggaataataagaacttttgttttatggaaattggcactac 399
Query: 129 atttgagaaataacaactattttaattgaatctaatttattttattagtctaaaatgttg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atttgagaaataacaactattttaattgaatctaatttattttattagtctaaaatgttg 339
Query: 189 gtgttttatatctttgacatacatatttgacaatgataagcaaatgaagttatcactcta 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtgttttatatctttgacatacatatttgacaatgataagcaaatgaagttatcactcta 279
Query: 249 tcactgtctcgtacatgtctccatattctttcaaataacccctgacaaattttcccttgc 308
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 278 tcactgtctcgtacatgtctccatactctttcaaataacccctgacaaattttcccttgc 219
Query: 309 tttgcactca 318
||||||||||
Sbjct: 218 tttgcactca 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_a17.g1 MSMg01no091_a17.g1 CHROMAT_FILE:
MSMg01no091_a17.g1 PHD_FILE: MSMg01no091_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:25 2005
(462 letters)
>mm_chr1_102629961_102630822
Length = 862
Score = 849 bits (439), Expect = 0.0
Identities = 458/465 (98%), Gaps = 3/465 (0%)
Strand = Plus / Plus
Query: 1 caaagtgatgatttgtgcattaggtaatggctccatagatttatgtttccagagttaacc 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 caaagtgatgatttgtgcattaggtaatggctccatagatttatgttttgagagttaacc 260
Query: 61 tttcatgtctcttttacagaggaaactaaatcctccttggcttatatttccagtaggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcatgtctcttttacagaggaaactaaatcctccttggcttatatttccagtaggact 320
Query: 121 ctcatgtgtttcattgtgagttctttatgcaaaacagggttttatcttgaatttgtgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatgtgtttcattgtgagttctttatgcaaaacagggttttatcttgaatttgtgaaa 380
Query: 181 tttattttggactaactggtgtttgacattgacccacatactaaatgtgtgaaagttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttattttggactaactggtgtttgacattgacccacatactaaatgtgtgaaagttgat 440
Query: 241 aaatgactctttatatggatatttaggaatatcaattcctctatcttaacacggtcagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgactctttatatggatatttaggaatatcaattcctctatcttaacacggtcagga 500
Query: 301 taagaatattaactatggaccataagaattctgttttgtgatgctaccaattgcctttac 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 taagaatattaactatggaccataagaattctgttttgtgatgttaccaattgcctttac 560
Query: 361 tttcaattatagttccagttggaaatttatggatgtgttgtcagctcaaatattatta-- 418
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 tttcaattatagttccagttggaaatttatggatgtgttgtcagctcaaaaattattatt 620
Query: 419 att-ttttttttacttttactgttaagggatatgctttttgtttg 462
||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attattttttttacttttactgttaagggatatgctttttgtttg 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
