AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATT
CAACCAGCGTCCCTTAACCGCTAAACTATCTCTCTAGCCCGGAGAGAATA
GACTTCCTTGGCATAGACAGACAGATCTCTGGGTTCAAGAGTAGCCTGGT
CTATAGAGCAGGTTCCAGTATAGCCAGGGATACACAGAGAAACCCTGTCT
TGCCAATTCCTCTACCCCACAAATAAAACAAGAAGAGGAAATAAAAATAC
AATAGATGACAAAGGGACTGGAGACGGGGTAACATAAGACTTAAGGGTCA
AGACATTTGAATCAGGGGCTGTTGAGATGGCTCCATGCAGAGGGCATGGG
TTGGACTCCCATTACTCACATGGTGGTTCATAACCACACATAACTTCTGT
TGCTGGGCATCTGATGCCCTCTTCTGACATCTATGGGCAACAAGCATATA
TGGTGTACACTGCACATAAGTGATGCACAAATGCAGGCAAAACACTAATA
CAGAAAACCAAAATTAATAAATCTCATTTAAAAACACACTTTATACTTTT
AAAAGAAATAAAAGATGAGCCATTTTCAGGGCCAGAAACTTGAGTCTAAC
CACTTTTACAGATATTTGGGACAGAAACCAGCAACCACACAGGGTGACAG
TCAACAGGAAGCCAGTCCTACCACACTCAGAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCTACCTTCTTGTGGCCATCTGAGGGACAGCCATGAGACATGCTT
GAGGACTGGGCTGGGTGAGTGAGTTGGAGAAGGGAAGTAGCCAAGGTGAC
AAGGCCAACCGTTCTGTGCCCAGGGCCATTTCTGCCTTCAGGAGAAGTCG
GTCCTTCTGCATCAGTCTTGGTGGTTTGCTGTATCACCTGACTGCTGGAC
CACTTTCCTTCCCAGGTCCTTCTCCCCCTCCACATGCAACCGATGGAATT
CCCCAGGTTTCCATCCTTAGCTACAGTCTGTCCAGATGACTAGAGTCACT
CTACTGCTGCAGTTTCCACCTGTGTCCTTAGCTTCATGTGCCTCGCCTCT
CCTTAGCTCCTCGGGTTCTAATGCTCAGCCACATCTCCTCTGCAACCCAC
CCTCCAATCACACTCTGCTCCTTCTTTGGAACTTCCATTTTTTATAACAG
GCTCCATACGCCACAGACCCGGGGCTTCAGCCTGCCTTTGTCTTATCTCT
CACCTTCCAAATCCATCCCATCGTCAGTCCTATGGATACTCACTTTAAGT
TTATTCAAATTTTTCCTGCTCCAGTAAGGTCCATCAAATATACCAAATAG
GGTGTTGGTAATTTTTT

Query= MSMg01no092_b02.b1 MSMg01no092_b02.b1 CHROMAT_FILE:
MSMg01no092_b02.b1 PHD_FILE: MSMg01no092_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:47 2005
         (585 letters)



>mm_chr1_85041719_85042703
          Length = 985

 Score = 1040 bits (538), Expect = 0.0
 Identities = 571/582 (98%), Gaps = 2/582 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattcaaccagcgtcc-cttaaccgctaaactatctctctagcccggagag-aataga 63
           |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 204 ggaattcaaccagcgtccacttaatcgctaaactatctctctagcccggagagtaataga 263

                                                                       
Query: 64  cttccttggcatagacagacagatctctgggttcaagagtagcctggtctatagagcagg 123
           ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttcttggcataggcaggcagatctctgggttcaagagtagcctggtctatagagcagg 323

                                                                       
Query: 124 ttccagtatagccagggatacacagagaaaccctgtcttgccaattcctctaccccacaa 183
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 ttccagtatagccagggatacacagagaaaccctttcttgccaattcctctaccccacaa 383

                                                                       
Query: 184 ataaaacaagaagaggaaataaaaatacaatagatgacaaagggactggagacggggtaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataaaacaagaagaggaaataaaaatacaatagatgacaaagggactggagacggggtaa 443

                                                                       
Query: 244 cataagacttaagggtcaagacatttgaatcaggggctgttgagatggctccatgcagag 303
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 cataagacttaagggtcaagacatttgagtcaggggctgttgagatggctccatgcagag 503

                                                                       
Query: 304 ggcatgggttggactcccattactcacatggtggttcataaccacacataacttctgttg 363
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggcgtgggttggactcccattactcacatggtggttcataaccacacataacttctgttg 563

                                                                       
Query: 364 ctgggcatctgatgccctcttctgacatctatgggcaacaagcatatatggtgtacactg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgggcatctgatgccctcttctgaaatctatgggcaacaagcatatatggtgtacactg 623

                                                                       
Query: 424 cacataagtgatgcacaaatgcaggcaaaacactaatacagaaaaccaaaattaataaat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cacataagtgatgcacaaatgcaggcaaaacactaatacagaaaaccaaaattaataaat 683

                                                                       
Query: 484 ctcatttaaaaacacactttatacttttaaaagaaataaaagatgagccattttcagggc 543
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctcattttaaaacacactttatacttttaaaagaaataaaagatgagccattttcagggc 743

                                                     
Query: 544 cagaaacttgagtctaaccacttttacagatatttgggacag 585
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cagaaacttgagtctaaccacttttacagatatttgggacag 785


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)