Query= MSMg01no092_b07.b1 MSMg01no092_b07.b1 CHROMAT_FILE:
MSMg01no092_b07.b1 PHD_FILE: MSMg01no092_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:48 2005
(315 letters)
>mm_chr1_58262708_58263421
Length = 714
Score = 542 bits (280), Expect = e-158
Identities = 304/312 (97%), Gaps = 3/312 (0%)
Strand = Plus / Minus
Query: 5 gaattctctcccattctcctgccaggcatcacttacctgtggagcagagtggtcctccat 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 514 gaattctctcccattctcctgccaggcatcacctacctgtggagcagagtggtcctccat 455
Query: 65 atggagagctagacacaatggccctctctcctccactctagggtaagaaccagtcaactc 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atggagagctagacataatggccctctctcctccactctagggtaagaaccagtcaactc 395
Query: 125 ctgggtgtgtgtggccctaacagtagggtggatgtccttccactagctcacctgtggttg 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 394 ctgggtgtgtgtggccctaacagtagggttgatgtccttccactagctcacctgtggttg 335
Query: 185 tgcctctgtcagctcctcataccacaaggcatagcaaaggttgtttcttattgtatcatg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 334 tgcctctgtcagctcctcataccacaaggcatagcaaaggttgtttcttattttttcatg 275
Query: 245 aaacaaaggattctctctggatattccccccttctccatcctctcctc-tctctctctct 303
|||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 274 aaacaaag-attctctctggatattccccccttctccatcctctc-tcctctctctctct 217
Query: 304 cactgggtttaa 315
||||||||||||
Sbjct: 216 cactgggtttaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_b07.g1 MSMg01no092_b07.g1 CHROMAT_FILE:
MSMg01no092_b07.g1 PHD_FILE: MSMg01no092_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:48 2005
(245 letters)
>mm_chr1_58150946_58151590
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Plus
Query: 1 atggttctgctcctttatccccgtcttgcgtatgaaggctgcacacacctgctctgccag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 201 atggttctgctcctttatccccgtcttgcgtatgaaggctgcacacacgtgctatgccag 260
Query: 61 ccaggcatgtgctgcaactaaccaaagtgtttgaaatgaaaccacctttaaaattctagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggcatgtgctgcaactaaccaaagtgtttgaaatgaaaccacctttaaaattctagg 320
Query: 121 tggtcagccgggaactaaggatgccgatgtccagtgtccacctgcgtgggacaagcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtcagccgggaactaaggatgccgatgtccagtgtccacctgcgtgggacaagcacag 380
Query: 181 aaaccgtccccaacacaaatgcctctggaggctctgtggtggcagatctcaatggactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaccgtccccaacacaaatgcctctggaggctctgtggtggcagatctcaatggactgg 440
Query: 241 cagta 245
|||||
Sbjct: 441 cagta 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
