Query= MSMg01no092_d13.b1 MSMg01no092_d13.b1 CHROMAT_FILE:
MSMg01no092_d13.b1 PHD_FILE: MSMg01no092_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:00 2005
(420 letters)
>mm_chr1_160252222_160253041
Length = 820
Score = 783 bits (405), Expect = 0.0
Identities = 414/417 (99%)
Strand = Plus / Plus
Query: 4 ggaattcacatttcaaccaagctcgcaagtggtagtgattctgttgttagagtcacccac 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacatttcaaccaagctcacaagtggtagtgattctgttgttagagtcacccac 263
Query: 64 atacagagaacctcttttctataactagatatgaaaataccagcatctatcttatatatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atacagagaacctcttttctataactagatatgaaaataccagcatctatcttatatatt 323
Query: 124 tgtcattggaatggttgcatgggtgccagggcacagtaatcagggcaggggctggctatg 183
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtcattggaatggttgcatgagtgccagggcacagtaatcagggcaggggctggctatg 383
Query: 184 ctattagtaattgtctaataagtgttaggtgtcattattagtctctgcctagcaaagcat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctattagtaattgtctaataagtgttaggtgtcattattagtctctgcctagcaaagcat 443
Query: 244 tacccatttatcatcacttcctttaaacgtcagttttctgaagcaggcttctgatattcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacccatttatcatcacttcctttaaacgtcagttttctgaagcaggcttctgatattcc 503
Query: 304 ctgggagagttttcagtctttttcctactgcctctttcccctataaatcttaccagtagg 363
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgggagagttttctgtctttttcctactgcctctttcccctataaatcttaccagtagg 563
Query: 364 gtcataactttgcaccttattatgtgcacacttgcatgttccaccggcagagcttta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtcataactttgcaccttattatgtgcacacttgcatgttccaccggcagagcttta 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_d13.g1 MSMg01no092_d13.g1 CHROMAT_FILE:
MSMg01no092_d13.g1 PHD_FILE: MSMg01no092_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:00 2005
(532 letters)
>mm_chr1_160331578_160332506
Length = 929
Score = 975 bits (504), Expect = 0.0
Identities = 524/532 (98%), Gaps = 3/532 (0%)
Strand = Plus / Minus
Query: 1 agtggctcaccagcaaagcgaggaaaggaaacagaattaaacaccacactgctaagtcta 60
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 729 agtggctcaccagcaaagcgaggaaaggaaacagaattaaacaccagaatgctaagtcta 670
Query: 61 tttccatcttgcctaggaggggcaggtctgttgtgtaaaaggtttgatttaaggacattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tttccatcttgcctaggaggggcaggtctgttgtgtaaaaggtttgatttaaggacattt 610
Query: 121 aaacttgttctccgacagagtggtttgcgaggatgcctttcaggggtacatctgaatatc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aatcttgttctccgacagagtggtttgcgaggatgcctttcaggggtacatctgaatatc 550
Query: 181 gatcaaatggctttaggagctgctgctaccccactgaggccttgtctcttcctaccatga 240
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 549 gatcaaatggctttaggagctgctg---ccccactgaggccttgtctcttcctaccatgg 493
Query: 241 ggatcaaggttctccttctaagaaaccctaagtacaaaatcagcattctatccatgctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggatcaaggttctccttctaagaaaccctaagtacaaaatcagcattctatccatgctaa 433
Query: 301 aggaaaacactgaacttgaacgattagtctcctttgcccaaacattggacatgttaatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aggaaaacactgaacttgaacgattagtctcctttgcccaaacattggacatgttaatat 373
Query: 361 ttttatttcacgtcatccttacaagaagcatttgggaagataatgaaactggggttaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttttatttcacgtcatccttacaagaagcatttgggaagataatgaaactggggttaaga 313
Query: 421 gaagtttagtcatttgtatgggaccaaatgactccaataaatttccttcagaaacgcacc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 312 gaagtttagtcatttgtatgggaccaaatgactccaataaatttccttcagaaacgtacc 253
Query: 481 tgtgtccccctactacagaaatgcctttctcaaatttatcaccagagagaag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtgtccccctactacagaaatgcctttctcaaatttatcaccagagagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 929
Length adjustment: 10
Effective length of query: 522
Effective length of database: 919
Effective search space: 479718
Effective search space used: 479718
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
