Query= MSMg01no092_f22.b1 MSMg01no092_f22.b1 CHROMAT_FILE:
MSMg01no092_f22.b1 PHD_FILE: MSMg01no092_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:12 2005
(542 letters)
>mm_chr1_10063462_10064402
Length = 941
Score = 975 bits (504), Expect = 0.0
Identities = 528/536 (98%), Gaps = 1/536 (0%)
Strand = Plus / Plus
Query: 7 gaattcttaatctgaccagcgactttatgttaatggtgtagtttttcaaccatacttttc 66
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 207 gaattcttaatctgatcagcgactttatgttaatggtgtagtttctcaaccatacttttc 266
Query: 67 atcttcttcagacggaaaacataatttgttaacagccacataaagaaatgtgacctgaaa 126
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atcttcttcagaaggaaaacataatttgttaacagccacataaagaaatgtgacctgaaa 326
Query: 127 aattttgtttatcgtggatgctaataaatgttcatataaaattttatgctggtttctctg 186
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atttttgtttatcgtggatgctaataaatgttcatataaaattttatgctggtttctctg 386
Query: 187 gcataagaaattatactaaaaaacaaaaaacaaatcagtgtttgccaaatggaaaaaaaa 246
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcataacaaattatactaaaaaacaaaaaacaaatcagtgtttgccaaatggaaaaaaaa 446
Query: 247 aaagatagttgaaaacattttcactgttttaaatgtctgctttttttatggaagaaaata 306
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aa-gatagttgaaaacattttcactgttttaaatgtctgctttttttatggaagaaaata 505
Query: 307 aattctaactttgtttttcttctttatgatcttataagtgaaggttcttcaggcctgttc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aattctaactttgtttttcttctttatgatcttataagtgaaggttcttcaggcctgttc 565
Query: 367 tgtatcacattgttttaaaatattttctgttttgcttcttcattctttcatggggtttac 426
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgtatcagattgttttaaaatattttctgttttgcttcttcattctttcatggggtttac 625
Query: 427 tgtgccaatttttaatttaaaaaccttggttttatgtataatgaaataattcccagaatt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgtgccaatttttaatttaaaaaccttggttttatgtataatgaaataattcccagaatt 685
Query: 487 tatgtgtcttaatgaaaaaacaattttgttttgagttctgcctgcaaacttaagtg 542
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tatgtgtcttaatcaaaaaacaattttgttttgagttctgcctgcaaacttaagtg 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 941
Length adjustment: 10
Effective length of query: 532
Effective length of database: 931
Effective search space: 495292
Effective search space used: 495292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_f22.g1 MSMg01no092_f22.g1 CHROMAT_FILE:
MSMg01no092_f22.g1 PHD_FILE: MSMg01no092_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:12 2005
(552 letters)
>mm_chr1_10237553_10238504
Length = 952
Score = 1060 bits (548), Expect = 0.0
Identities = 551/552 (99%)
Strand = Plus / Minus
Query: 1 ttctgcttttgttctagagaaaataaagtaaggagaaacaccaggaacaagaatgcagac 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 752 ttctgcttttgttctagagaaaatacagtaaggagaaacaccaggaacaagaatgcagac 693
Query: 61 acattcttccaaattatgtttattgacatagtaaagctcaggtcacagttaacaattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acattcttccaaattatgtttattgacatagtaaagctcaggtcacagttaacaattaac 633
Query: 121 caagtcctagttacatatacaagatgcagttgactccctcagcagtgggtcataactgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 caagtcctagttacatatacaagatgcagttgactccctcagcagtgggtcataactgag 573
Query: 181 tgcagtagctcagcattaccatgtgaggttcaggtagtggccaagaagagaaacaggggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgcagtagctcagcattaccatgtgaggttcaggtagtggccaagaagagaaacaggggt 513
Query: 241 ctttctgcccataatttttagctggcagaaagtaataggattttcctggtcccattgggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctttctgcccataatttttagctggcagaaagtaataggattttcctggtcccattgggc 453
Query: 301 tttttcagataggaacttatagagcccagagttgccactttaggaatgtgcagttgagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tttttcagataggaacttatagagcccagagttgccactttaggaatgtgcagttgagcc 393
Query: 361 attctaactatgctaatgtctgttcacttgtctagtgtgtgttcaggggaaactgtaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 attctaactatgctaatgtctgttcacttgtctagtgtgtgttcaggggaaactgtaggt 333
Query: 421 ggatgaagccatttatactgtgtgaagctattttgagaagagaatttaaaggggtagaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggatgaagccatttatactgtgtgaagctattttgagaagagaatttaaaggggtagaca 273
Query: 481 tggagtaaggagagtttggtttatcttttagagattgtgttcagtattttgaaataagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tggagtaaggagagtttggtttatcttttagagattgtgttcagtattttgaaataagtc 213
Query: 541 tatggatgtttc 552
||||||||||||
Sbjct: 212 tatggatgtttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
