Query= MSMg01no092_g12.b1 MSMg01no092_g12.b1 CHROMAT_FILE:
MSMg01no092_g12.b1 PHD_FILE: MSMg01no092_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:15 2005
(374 letters)
>mm_chr1_10749944_10750717
Length = 774
Score = 629 bits (325), Expect = 0.0
Identities = 357/369 (96%), Gaps = 4/369 (1%)
Strand = Plus / Plus
Query: 5 gaattcacgatgttccca--tggctggccatggatgtctacaaggctgagaacaagactt 62
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacgatga--ccaaatggctggccatggatgtctacaaggctgagaacaagactt 262
Query: 63 tgtactcttgggaattcgccaagttcactgtaactttggtggtcagtcaaccagatagtc 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtactcttgggaatttgccaagttcactgtaactttggtggtcagtcaaccagatagtc 322
Query: 123 ttcttaggagtgagaattgctgccagtgtaaacatcaaggcaatttctaccaaggaattg 182
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 323 ttcttaggagtgagaattgctgccagtgcaaacatcaaggcaatttctaccaaggaattg 382
Query: 183 ggagatctgaccttgactgctcttcatgatgtggttacggtagcaatcataatctatggg 242
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 383 ggagatctgaccttgactgctcttcatgatgaggttacggtagcaatcataatctatggg 442
Query: 243 gattagttttttacttttgctaattcgcaggggtaaaacatccacacagccagaactcca 302
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 443 gattagttttttacttttgctaattcgcagggggaaaacatccacacagccagaactcca 502
Query: 303 agtcaaggaccatctcatgactgcatctatctaaacagcgaatgctaactaacagcacat 362
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agccaagtaccatctcatgactgcatctatctaaacagcgaatgctaactaacagcacat 562
Query: 363 gttctcaca 371
||| |||||
Sbjct: 563 gttatcaca 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_g12.g1 MSMg01no092_g12.g1 CHROMAT_FILE:
MSMg01no092_g12.g1 PHD_FILE: MSMg01no092_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:15 2005
(434 letters)
>mm_chr1_10909351_10910184
Length = 834
Score = 766 bits (396), Expect = 0.0
Identities = 426/436 (97%), Gaps = 3/436 (0%)
Strand = Plus / Minus
Query: 1 aacagaagttgcttagttcaatatgaatgattcatttgggattcacatctcagaattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aacagaagttgcttagttcaatatgaatgattcatttgggattcacatctcagaattctc 716
Query: 61 tataaaagcagatgtatgtgcacatagtgtgcacacaaaaagagactcattctaaagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tataaaagcagatgtatgtgcacatagtgtgcacacaaaaagagactcattctaaagaat 656
Query: 121 tgactcttgtaattatggaagctgaaaagtttcatgaagcacagttggagagtgggagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 655 tgactcttgtaattatggaagctgaaaagtttcatgaagcacagttggagagtggaagat 596
Query: 181 ccagaagagtgatagtttgtttccaggcc-aaaatcttgtttgtttaaaaccctaaaaga 239
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 595 ccagaagagtgatagtttgtttccaggccaaaaatcttctttgtttaaaaccctaaaaga 536
Query: 240 actcctatttaaattccagttcaaaggcaggcaaagattgacatctcatctcaaataatc 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 535 actcctatttaaattccagttcaaaggcaggcaaagattgacatctcacctcaaataatc 476
Query: 300 agataggagacataa-ggccttaccggagggtacactcattcccccgtttatgtcttcgg 358
|||||||||||| || |||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 475 agataggagaca-aagggccttaccggagggtacactcattcttctgtttatgtcttcgg 417
Query: 359 aggaccacatgctttccttgtatgccaattcacaagtttatctcatctaaaaccagcctc 418
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 416 aggaccacatgctttccttgtatgccaattcaaaagtttatctcatctaaaaccagcctc 357
Query: 419 attgaaacactgcaat 434
||||||||||||||||
Sbjct: 356 attgaaacactgcaat 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
