Query= MSMg01no092_g16.b1 MSMg01no092_g16.b1 CHROMAT_FILE:
MSMg01no092_g16.b1 PHD_FILE: MSMg01no092_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:16 2005
(303 letters)
>mm_chr1_68229638_68230340
Length = 703
Score = 557 bits (288), Expect = e-163
Identities = 297/300 (99%), Gaps = 1/300 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcattctcttta-taaacaggagcgtaggaaagcatcgctcacgtctttgact 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttcattctctttaataaacaggagcgtaggaaagcatcgctcacgtctttgact 263
Query: 64 tttgcctatggaccggagatctgcgtacatttatagcacacataattggcaaatgcctta 123
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgcctatggaagggagatctgcgtacatttatagcacacataattggcaaatgcctta 323
Query: 124 ggcaaaaagacaaacatagcacatggcctgcaggttgctggaatagcttcctcggtgcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggcaaaaagacaaacatagcacatggcctgcaggttgctggaatagcttcctcggtgcca 383
Query: 184 actgctggagcatttgagggagtctctgctgggtggcttctctggacattctttatctaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actgctggagcatttgagggagtctctgctgggtggcttctctggacattctttatctaa 443
Query: 244 aacaatccagagaaactactgattttttttccccttctggtctttagtgaaagctgtaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacaatccagagaaactactgattttttttccccttctggtctttagtgaaagctgtaga 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_g16.g1 MSMg01no092_g16.g1 CHROMAT_FILE:
MSMg01no092_g16.g1 PHD_FILE: MSMg01no092_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:16 2005
(575 letters)
>mm_chr1_68258044_68259018
Length = 975
Score = 1104 bits (571), Expect = 0.0
Identities = 574/575 (99%)
Strand = Plus / Minus
Query: 1 attactatcaattaggatataacttgtttcttcaagaataattattaaaaactacataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 attactatcaattaggatataacttgtttcttcaagaataattattaaaaactacataaa 716
Query: 61 acttctgttatggttttgaatgcatatgaccttttaggcaatttcaagaacatctacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 acttctgttatggttttgaatgcatatgaccttttaggcaatttcaagaacatctacaag 656
Query: 121 gatattacctaaataggggtaaactatgtgacttgttaattgttatgtctttgcagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gatattacctaaataggggtaaactatgtgacttgttaattgttatgtctttgcagagta 596
Query: 181 tattagatattccttaatcagtttcaggtccaggttaataaatgagtgaaaatgtctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tattagatattccttaatcagtttcaggtccaggttaataaatgagtgaaaatgtctgtt 536
Query: 241 tctcgtgaacatacctaatctttagagttactaatgagataataccctacattgaggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tctcgtgaacatacctaatctttagagttactaatgagataataccctacattgaggagt 476
Query: 301 ccaaaaactagttgggcttgaagctgatgaatataatgactacagttgatctttgcaaaa 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 475 ccaaaaactagttgggcttgaagctgatgaatataatgactagagttgatctttgcaaaa 416
Query: 361 gtaaagaatatgagacaccatgttatttcattttattctttaattatggttcacacacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gtaaagaatatgagacaccatgttatttcattttattctttaattatggttcacacacac 356
Query: 421 actaaattataacatttagtgttataataatataacaaaacattcatgtgtgtttaagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 actaaattataacatttagtgttataataatataacaaaacattcatgtgtgtttaagtc 296
Query: 481 tgaccacttgtggttggttgatctatcaggagacacatccttggagaagagaaattctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaccacttgtggttggttgatctatcaggagacacatccttggagaagagaaattctcc 236
Query: 541 ttccttcgcagccagtatttgtctgtggcttttca 575
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ttccttcgcagccagtatttgtctgtggcttttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
