MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-093A04
Chromosome	1 (Build37)
Map Location	144,751,604 - 144,752,047
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC639376
Downstream gene	LOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC639376 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC545369 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1986 ESTs, 7 Proteins pseudo : _no_value

name	Cdc73 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214498 MGI:2384876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B3galt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26878 MGI:1349461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623138 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623138
definition	note : heterogeneous nuclear ribonucleoprotein A3 pseudogene pseudo : _no_value

name	Glrx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Trove2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20822 MGI:106652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uchl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56207 MGI:1914848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdc73 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122444 GeneID:214498 MGI:2384876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Vcell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) transcript_id : NM_145991.1

name	B3galt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801472 GeneID:26878 MGI:1349461
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 transcript_id : NM_020025.3

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370331 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_001038593.1

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370339 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_001038592.1

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370329 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_023505.2

name	Glrx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370334 GeneID:69367 MGI:1916617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaredoxin 2 (thioltransferase) transcript_id : NM_001038594.1

name	Trove2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134133269 GeneID:20822 MGI:106652
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TROVE domain family, member 2 transcript_id : NM_013835.2

name	Uchl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9625046 GeneID:56207 MGI:1914848
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin carboxyl-terminal esterase L5 transcript_id : NM_019562.1

name	Cdc73 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122445 CCDS:CCDS15341.1 GeneID:214498 MGI:2384876
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hyperparathyroidism 2 homolog protein_id : NP_666103.1

name	B3galt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542173 CCDS:CCDS15342.1 GeneID:26878 MGI:1349461
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008378 - galactosyltransferase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0008499 - UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity [Evidence IDA] GO_process : GO:0009312 - oligosaccharide biosynthesis [Evidence IDA]; GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 protein_id : NP_064409.2

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370340 CCDS:CCDS15343.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : glutaredoxin 2 isoform a protein_id : NP_001033681.1

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370332 CCDS:CCDS15344.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 3 product : glutaredoxin 2 isoform b protein_id : NP_001033682.1

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370335 CCDS:CCDS15344.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 4 product : glutaredoxin 2 isoform b protein_id : NP_001033683.1

name	Glrx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370330 CCDS:CCDS15344.1 GeneID:69367 MGI:1916617
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0009053 - electron donor activity [Evidence ISS]; GO:0015038 - glutathione disulfide oxidoreductase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0042262 - DNA protection [Evidence ISS]; GO:0006749 - glutathione metabolism [Evidence ISS]; GO:0006467 - protein thiol-disulfide exchange [Evidence ISS]; GO:0006980 - redox signal response [Evidence ISS]; GO:0030503 - regulation of cell redox homeostasis [Evidence ISS]; GO:0009966 - regulation of signal transduction [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0042542 - response to hydrogen peroxide [Evidence ISS]; GO:0010033 - response to organic substance [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009266 - response to temperature stimulus [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : glutaredoxin 2 isoform b protein_id : NP_075994.2

name	Trove2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305523 CCDS:CCDS15345.1 GeneID:20822 MGI:106652
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA] codon_start : 1 note : Sjogren syndrome antigen A2 product : TROVE domain family, member 2 protein_id : NP_038863.1

name	Uchl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9625047 CCDS:CCDS15346.1 GeneID:56207 MGI:1914848
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : biquitin carboxyl-terminal esterase L5 product : ubiquitin C-terminal hydrolase 37 protein_id : NP_062508.1

name	LOC639376 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639376
definition	number : 3 pseudo : _no_value

name	LOC639376 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639376
definition	number : 2 pseudo : _no_value

name	LOC639376 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639376
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:192224
definition	standard_name : fc06a05.x1

name	(CDS detail)
type	STS
link
xref	UniSTS:225051
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123321
definition	standard_name : 16.MMHAP84FRF7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:210552
definition	standard_name : RH136572

name	(CDS detail)
type	STS
link
xref	UniSTS:207227
definition	standard_name : RH127034

name	(CDS detail)
type	STS
link
xref	UniSTS:463990
definition	standard_name : HRPT2__6588

name	(CDS detail)
type	STS
link
xref	UniSTS:231578
definition	standard_name : RH142331

name	(CDS detail)
type	STS
link
xref	UniSTS:495935
definition	standard_name : B3galt2

name	(CDS detail)
type	STS
link
xref	UniSTS:231712
definition	standard_name : RH142465

name	(CDS detail)
type	STS
link
xref	UniSTS:178447
definition	standard_name : AI645710

name	(CDS detail)
type	STS
link
xref	UniSTS:217597
definition	standard_name : RH134315

name	(CDS detail)
type	STS
link
xref	UniSTS:178446
definition	standard_name : AI646302

name	(CDS detail)
type	STS
link
xref	UniSTS:234230
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178445
definition	standard_name : U66843

name	(CDS detail)
type	STS
link
xref	UniSTS:128789
definition	standard_name : D1Mit423

name	LOC545369 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234324 GeneID:545369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1986 ESTs, 7 Proteins product : similar to ribosomal protein L4 pseudo : _no_value transcript_id : XR_034542.1

clone name	MSMg01-143I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-334P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-093A04.T7 (MSMg01no093_a04.b1)	MSMg01-093A04.TJ (MSMg01no093_a04.g1)
ACC	AG310561	AG310562
length	1,210	1,405
length of high quality (start - end)	444 (78 - 521)	323 (75 - 397)
definition	CHROMAT_FILE: MSMg01no093_a04.b1 PHD_FILE: MSMg01no093_a04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:04 2005	CHROMAT_FILE: MSMg01no093_a04.g1 PHD_FILE: MSMg01no093_a04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:04 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNNCCGTCAGTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCTGAGAAAGGAAATATGCTGTTGAAAGTGGTGAATATTAAGTCAATG AAACTAAGATGCTCTATTTGAAAAACATCATGTGGAATTCACTTTTTTAT TTTAAGATCAATTATTTAATTCTGCTCTCTGATTCTACCTGTCAGATTTT GTGCAGCTATGCTAATCACATTCGCTAATATGCATTTATTCCTAAACAAC CATGCATTTGTGTGATAACTTTCCTCCAATTATTATTTCTCAGTCTCAGA ACAGGTCCCTTGGCAAGTTCGAACCAAGATATTTTATTTTCAAAGCCTTT AATGAAGTTGCCTGTGAATGAGACAACAGTGCTGCGTAGGAACTGGATAA TGTCTAAATATTGATTGCGGTGTCTGTCACAGCTTTTCAAGTACTTGTAT TTAATTCAGTCTAAATAAATCAGGAGTTAGAAACTGGCAGATGAAGATAG CACATTTAGCTTTTAAAACATAATTCAGAATATTTGCTGTACTACTAATA ATTGATAGTTGCGCTGATTTGTATAGCCATCCAACTGATAACCTATTATA TATTTTGTATTTTTTCAGCATGTATTTCTCAGTCTCCTATATTATAATTA GTACTTCTTGTCTACATTTTGCCTAATTATTTTCTTTCTACTTCCGTTCT ATCTTCCTATCATCTTCCTTTCTTTGTGTTCTTACTTCTTTGTTTTAACC TTTACTCTGTAATCTCCATATTTTTTCTTTTTCCTTATCCATCCTTATTT TCTTTCTTTTTTTTCTATTTTTTATTCTCCATTCACTTTTTTCTCTTTCC CTTCTTCCTCTTTTTTTTTTTCTTCTTCTGTTTTTCATTTCTTATTCTTT TTTTTATTCTTCTTCTCTTTATTTTTTTTTTTTTTCCTCTCAATTCTTTT CTTTTTTCTTTCATTTTTTCTCTTTTTTTCTATTTTTTTATCTTTCTTTT TCTTTCTCCTTTCTTATACACCTTTTTTTTTTTCTTTCTCTTTTCTCCTT TCCCCTTCTTCTTACTCTTCATCTATTATTTTCTCCGTTTTTCCCTTTCT ATCTTCATTTTTTTTTTCTCTTTCTTTCCTTACTCTTCTTTCTATTTTCT CTTTATTCCTCCCTTTCCTATTCTTTCTTTCTCTCTGGTCTTCCTCTCTC TCCTCACTCT	GTTTNNGAAGGCATGGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXCTCGTCACACACCATAGCCATGCTTG CAAGTTAATACTTGTATAAGATGTAAGTTACAGTAGCTAAATGATGAAGG CAGCCTAGGCAATCTTCAACAGAAAGATAAACGAAGGACTGTGATGCACA CACAACAAGAATCCTAGGCATAAATGAGGATAAGGACATGCTGCTGGTGG GGAAATGCATATAACTCTAAATAATCATATTAAGTGAACGTTAAGGCAGT CTCAAAATACCCATATTGCATATTTTGCTCATTCATGGTTCCTACATATT TAGGTAAGTAGGTAGATAGGTAGATAGATAGATAGATAGATAGATACATA TTTTTTTTTTTTTTTCCTCTTCCTTTCTTTTTTTTTTTTTCTATTTTCTC CCCCCCTTTTTTCTCCCCCCCCCCCCTCTTCTTTTTTCTTACTTTTATAA AAAAAAAAGGGGTGGTCCTCTTTTCTCTTTTCCTTACTCTTCTATCTCTT CTCTTCTTCCTTCCTCTCTTTCTTATTTCTCCCTCCCTTTCTTTTTTCCT CTCTCTTCTCTATTTTCACTTCATTTTCTTTCTCTTATCTTTTTTTTTTT TATCTTTTTTTCTTCTTTCTTTTCTTCTTTTCTTTTTTCTTTTTTTTCTC TTTTTTTTCTCTCCTCTTTCTTTTCTTTCTTTCTTTTCTTTTTTCTCTCT TTCCTCTTCCTCTCTCCTTTTTCCTCCTTTCTTCTCCTCTTCTCTTTCTT CTCTCTCCTTTCCTCTTCTTTCCCCTCTTTACTCATCATTCCTCTCTTTC TTTTATTTCATATTTTTTTTTTTTCCTATTTCCCCTCTTTTTCCCTCCTT CTTTCTTTTTCTCTTTTCTTTCACATTTTTCCTCTACTCTTCTCTCCTTT TTTTTTTTATCTTCTTTTTACTCTTATTTTCTTCTTCCATTCTATCTCGC TTCTCTTCTCATCTTTCTTTTTACTTTCTTTCTCTCTTATATTCTTCCTT TCTTCTTTTTCTTCTCTTTTCACTTTTCCCTCCCTTTCCTACTTCTTCCT ATTTTCTCTTTCCCCTTCTATCTCTTCCCTTTTTTTTACTCCTCTCTTTT TCTCTCTTTTTCTCTTCTTCTCTTTCCTTTCTTCTTATTCTCTCCTCTCT TTTTTGCGTTTCTTTCCCTCTCCTTCTCTCTTCCTCTTCTCTTTCCTTTC ATCCCCTACTTCCCATCACTCTCTCTTATTCTACTTTACACCTTCTCCTA CTTTTCTCTTTCTACTTCCTATTCCTCTATTTCTTTTACTCTTTTTTCTC TACTTATCTATTTAATCATTATATCTTCTCTATCTTTTCCTCTCTCTTCT GTCTA
quality values	Open. Hide. 0 0 0 3 6 6 6 8 7 9 9 9 9 13 14 14 11 10 10 11 12 9 9 14 19 21 20 18 18 15 12 12 23 26 42 37 36 42 42 42 42 48 54 50 50 48 48 48 48 50 50 53 57 57 57 50 53 50 50 50 53 53 53 50 50 30 30 16 16 15 13 13 13 13 18 18 15 24 24 28 28 23 24 34 41 44 53 53 53 53 53 43 43 47 53 53 47 48 50 57 57 57 68 68 68 68 35 25 16 12 11 13 13 15 21 25 31 41 40 44 39 43 43 47 57 57 57 48 43 37 37 32 43 43 57 68 68 68 68 51 50 50 50 68 68 51 51 51 51 51 51 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 57 57 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 62 62 62 62 62 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 44 44 35 35 35 44 44 62 62 62 52 52 62 62 62 62 45 45 45 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 33 33 11 12 11 33 33 62 62 62 62 62 62 62 62 62 62 62 62 44 43 31 31 39 43 62 62 52 52 52 62 62 62 62 62 62 62 45 43 43 62 62 62 44 43 24 21 26 16 18 12 18 15 15 15 28 28 52 57 59 59 59 59 68 44 44 18 18 13 24 24 42 43 57 57 57 57 57 57 43 43 39 39 43 57 44 57 57 57 57 57 57 57 44 44 38 28 23 23 38 38 43 23 23 21 38 26 19 19 17 17 32 19 20 23 33 43 43 44 38 32 20 20 32 24 32 24 36 27 29 29 36 32 32 32 15 15 18 18 23 32 44 24 24 10 10 10 23 23 32 32 23 27 32 44 34 59 41 41 37 39 44 46 43 36 32 23 23 23 23 13 13 13 32 23 21 13 13 15 23 23 35 37 36 29 28 21 14 12 16 19 19 18 23 11 11 9 12 20 24 34 33 33 33 25 19 19 12 12 13 17 11 11 11 12 11 11 11 9 15 7 7 6 6 8 10 10 10 10 9 10 9 9 9 9 12 10 10 15 13 14 20 20 34 34 39 43 43 39 39 39 43 39 43 37 37 24 23 19 24 28 34 34 30 25 11 10 8 8 8 8 15 22 30 23 15 12 9 9 11 10 14 14 20 19 25 15 15 8 8 8 10 10 12 12 16 15 16 10 8 8 8 8 8 8 10 18 21 12 8 8 8 6 8 8 6 7 10 10 10 10 10 11 11 13 17 18 16 11 11 10 10 9 9 11 8 10 13 8 11 11 12 12 11 9 9 11 12 11 11 16 12 13 12 12 10 10 8 10 10 10 10 8 8 8 8 10 10 13 9 9 9 10 12 8 8 8 8 10 6 6 8 8 8 8 8 8 8 8 8 13 12 11 10 14 10 8 8 10 10 11 11 12 10 6 6 10 8 8 6 6 8 8 8 6 6 6 6 8 9 9 13 10 14 9 9 8 8 10 8 11 10 9 9 10 8 6 6 8 8 8 9 8 8 14 9 9 9 10 9 10 10 15 13 10 10 9 9 12 13 10 15 10 10 10 8 8 8 13 10 13 13 9 9 10 12 10 8 8 6 6 8 8 9 9 10 11 12 10 8 8 8 8 8 8 9 9 9 8 8 9 9 10 10 9 9 10 8 8 9 7 12 8 8 8 8 8 8 13 12 9 9 9 8 8 8 8 8 8 8 8 10 9 9 9 9 9 8 14 14 10 8 8 6 6 10 7 7 8 8 8 8 15 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 15 11 11 13 11 11 12 12 12 11 10 9 8 8 7 6 8 8 6 6 8 8 10 8 10 7 9 10 15 17 24 19 14 14 10 11 8 8 8 8 9 10 13 13 10 8 10 10 10 9 9 11 8 8 6 6 8 6 6 8 8 11 10 13 6 7 8 8 9 8 8 8 8 8 8 8 8 8 10 15 13 10 8 8 7 7 10 8 8 8 8 8 8 8 9 10 10 10 11 15 11 11 10 15 24 24 16 11 11 11 11 18 18 16 13 10 8 8 8 9 9 9 10 9 9 9 9 9 8 9 10 10 12 13 10 10 6 7 8 6 8 8 8 8 8 8 10 11 12 11 9 8 8 8 8 13 10 11 11 12 9 9 9 9 15 9 10 12 9 9 7 6 10 10 10 8 8 6 6 6 8 8 8 9 11 8 9 9 12 9 8 11 10 6 6 8 8 10 8 8 8 8 8 9 11 8 8 8 6 7 12 12 9 9 10 13 8 8 7 7 7 6 8 10 8 10 8 8 8 7 8 10 11 11 11 11 9 10 15 9 8 8 8 8 8 8 8 8 6 7 12 10 12 8 8 8 8 11 11 8 9 9 7 7 7 8 8 8 10 11 10 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8	Open. Hide. 9 9 29 3 0 0 3 7 6 6 6 6 7 7 7 6 6 6 6 8 6 6 6 6 9 9 13 7 8 8 6 8 10 12 21 19 19 10 10 10 22 21 31 30 30 35 38 36 38 36 37 37 42 47 47 47 47 53 53 53 53 53 54 57 57 48 28 21 11 10 11 11 17 23 28 24 28 31 18 13 13 26 26 57 57 50 50 50 50 50 50 53 50 50 50 53 42 38 38 36 53 33 50 33 33 33 33 19 17 10 10 10 14 18 21 30 25 37 37 37 37 37 37 39 47 47 42 42 43 43 34 34 33 33 34 42 42 47 47 47 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 68 68 68 68 57 57 42 42 42 35 35 42 44 57 57 57 57 68 68 68 68 68 68 59 59 59 59 57 57 48 50 50 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 68 68 59 59 57 57 57 57 59 68 68 57 57 57 57 52 52 52 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 54 54 54 57 57 57 68 68 68 59 68 59 59 57 57 57 59 59 41 41 20 20 20 41 41 68 68 68 59 59 57 57 57 42 42 33 44 44 57 59 59 59 59 57 57 57 57 57 68 68 68 68 68 59 44 44 30 30 30 44 44 48 48 48 57 48 48 48 48 48 48 48 48 54 54 48 48 48 48 48 57 48 48 48 48 48 48 43 43 41 41 43 32 31 20 17 12 12 12 12 10 10 9 9 11 16 11 13 9 11 10 10 10 13 10 12 9 6 6 6 6 8 8 12 12 8 10 8 8 8 8 10 10 10 13 18 21 19 15 13 16 10 8 8 8 8 11 11 12 8 8 8 8 8 11 8 8 6 6 8 21 22 23 15 13 10 10 14 15 18 18 18 18 13 10 8 8 8 8 8 10 9 9 10 10 10 10 10 10 8 8 8 6 8 8 8 8 8 8 8 8 11 10 10 11 10 9 8 8 9 9 12 12 10 6 6 7 6 8 8 10 10 10 10 10 11 8 8 6 7 8 8 10 12 11 16 10 10 10 10 10 8 8 8 8 8 8 9 10 10 10 8 9 10 11 8 8 8 8 8 9 9 13 9 8 8 6 6 6 6 8 8 8 8 8 6 9 9 8 8 10 8 8 8 8 8 8 9 9 10 8 8 8 12 10 12 12 14 12 13 9 9 12 9 9 10 10 8 10 10 12 9 11 10 8 10 8 8 6 6 8 7 14 6 6 8 8 8 9 9 8 9 10 8 11 6 6 8 6 6 8 8 10 11 12 23 16 16 12 12 10 11 8 6 6 6 8 8 13 16 12 13 14 14 10 13 10 10 9 15 12 8 8 8 10 10 8 11 9 9 10 12 12 7 7 10 10 8 10 10 9 9 9 9 10 10 16 8 8 8 8 11 13 12 12 12 14 16 14 10 10 8 8 8 8 8 10 7 9 10 10 20 20 20 18 18 19 26 10 10 10 8 8 8 8 10 12 10 14 15 15 18 15 10 8 12 10 10 10 11 10 8 8 8 10 8 8 8 8 13 8 8 8 8 8 6 6 8 6 6 8 8 9 9 9 9 12 11 11 11 8 13 8 8 8 8 10 19 19 15 8 8 12 8 8 7 9 13 12 16 15 19 11 10 9 9 12 11 8 8 8 8 10 8 8 8 7 7 10 8 12 10 12 10 9 8 8 13 11 8 8 9 9 8 8 6 6 8 8 9 9 10 9 9 11 9 9 8 10 11 11 8 9 9 13 9 10 8 8 6 6 8 8 10 8 10 8 8 8 13 10 13 13 10 10 9 11 11 10 10 10 10 10 9 9 9 10 10 10 15 24 30 30 22 25 12 12 10 10 8 10 8 8 8 8 9 10 10 11 9 9 10 8 10 8 8 8 8 8 7 7 10 8 6 6 8 6 8 13 10 15 9 8 8 10 8 8 8 12 12 10 11 11 10 10 10 9 9 7 7 8 9 9 15 15 12 12 12 9 11 12 12 10 10 10 10 10 8 9 13 8 8 6 7 8 8 6 6 8 8 8 10 8 8 8 8 8 8 8 8 7 9 9 9 9 9 13 10 10 8 8 8 10 10 10 10 8 8 8 8 10 11 11 12 10 8 10 10 10 12 11 12 9 9 9 9 9 8 8 8 8 8 6 6 8 8 15 16 16 10 8 8 8 8 8 8 9 13 10 11 11 11 7 6 8 8 8 8 9 10 10 11 11 11 8 8 6 7 12 12 9 8 8 8 8 10 11 18 13 13 10 10 10 9 9 8 8 8 6 6 8 8 8 8 8 8 9 9 8 8 6 6 6 8 13 15 10 10 8 10 8 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 11 8 8 8 8 11 11 11 15 15 11 10 8 7 7 8 8 10 11 10 13 8 10 11 13 13 12 8 8 8 8 8 10 10 11 18 10 8 8 8 8 8 6 7 11 10 9 9 10 10 8 8 6 6 8 8 8 8 7 6 8 8 8 8 8 12 12 10 10 10 10 12 8 8 7 6 10 8 9 10 9 9 9 9 9 8 8 8 10 10 8 10 8 10 8 8 8 8 11 10 10 8 8 8 8 8 8 8 8 8 8 14 8 9 11 11 8 8 10 11 13 13 11 8 8 6 6 6 6 7 8 8 8 7 6 8 8 9 9 9 9 8 8 6 6 8 10 10 10 9 8 11 7 7 8 10 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 10 8 6 6 6 6 10 10 8 8 8 8 10 10 11 8 8 6 7 7 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 12 9 8 11 8 8 8 10 7 6 8 8 8 8 8 8 8 12 11 16 16 16 9 6 6 8 8 8 8 14 9 8 8 8 8 8 8 11 12 11 8 8 7 7 10 13 8 6 6 6 8 10 10 11 12 8 8 8 8 10 11 12 12 10 9 13 10 9 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no093_a04.b1 MSMg01no093_a04.b1 CHROMAT_FILE:
MSMg01no093_a04.b1 PHD_FILE: MSMg01no093_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:04 2005
         (444 letters)



>mm_chr1_144751404_144752247
          Length = 844

 Score =  812 bits (420), Expect = 0.0
 Identities = 438/444 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagtggtgaatattaagtcaatgaaactaagatgctctatttgaaaaacatcatgtggaa 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 644 aagtggtgaatattaagtcaatgaaactaagatgttctatttgaaaaacatcatgtggaa 585

                                                                       
Query: 61  ttcacttttttattttaagatcaattatttaattctgctctctgattctacctgtcagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttcacttttttattttaagatcaattatttaattctgctctctgattctacctgtcagat 525

                                                                       
Query: 121 tttgtgcagctatgctaatcacattcgctaatatgcatttattcctaaacaaccatgcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tttgtgcagctatgctaatcacattcgctaatatgcatttattcctaaacaaccatgcat 465

                                                                       
Query: 181 ttgtgtgataactttcctccaattattatttctcagtctcagaacaggtcccttggcaag 240
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 464 ttgtgtgataactttcctccaattattatttctcagcctcagaacaggtcccttggcaag 405

                                                                       
Query: 241 ttcgaaccaagatattttattttcaaagcctttaatgaagttgcctgtgaatgagacaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 404 ttcgaaccaagatattttattttcaaagcctttaatgaagttgcctgtgaacgagacaac 345

                                                                       
Query: 301 agtgctgcgtaggaactggataatgtctaaatattgattgcggtgtctgtcacagctttt 360
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 344 agtgctgcgtaggaactggataatgtctaaatattgattgtagtgtctgtcacagctttt 285

                                                                       
Query: 361 caagtacttgtatttaattcagtctaaataaatcaggagttagaaactggcagatgaaga 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 284 caagtacttgtatttaattcagtttaaataaatcaggagttagaaactggcagatgaaga 225

                                   
Query: 421 tagcacatttagcttttaaaacat 444
           ||||||||||||||||||||||||
Sbjct: 224 tagcacatttagcttttaaaacat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space:   361956
Effective search space used:   361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information