Query= MSMg01no094_h11.b1 MSMg01no094_h11.b1 CHROMAT_FILE:
MSMg01no094_h11.b1 PHD_FILE: MSMg01no094_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:07 2005
(321 letters)
>mm_chr1_60054283_60055004
Length = 722
Score = 542 bits (280), Expect = e-158
Identities = 301/310 (97%), Gaps = 5/310 (1%)
Strand = Plus / Plus
Query: 15 gaattctttctccca---tcatctccttctagtgagtctctaggcagagctcttgcaact 71
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattctttctc--aaaatcatctccttctagtgagtctctaggcagagctcttgcaact 272
Query: 72 gctggttgagaacccaaacagcaagggttttatttccttttgaggaaatgagagcaggac 131
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gctggttgagaacagaaacagcaagggttttatttccttttgaggaaatgagagcaggac 332
Query: 132 ataggaaaactattttttcctttatggcattaaaataatttttaaaacaacaactatatt 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ataggaaaactattttttcctttatggcattaaaataatttttaaaacaacaactatatt 392
Query: 192 aattacaggtctataattatttctaggaagacaggatttaggtcaaatggccatatagca 251
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 393 aattacaggtctataattatttctagtaagacaggatttaggtcaaatggccatatagca 452
Query: 252 tctaaacaaatagttatgaatgtgaagtgctaataaactactgcctatgtgagacaaaga 311
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 453 tctaaacaaatagttatgaatgcgaagtgctaataaactactgcctatgtgagacaaaga 512
Query: 312 ctcagagacc 321
||||||||||
Sbjct: 513 ctcagagacc 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 722
Length adjustment: 9
Effective length of query: 312
Effective length of database: 713
Effective search space: 222456
Effective search space used: 222456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no094_h11.g1 MSMg01no094_h11.g1 CHROMAT_FILE:
MSMg01no094_h11.g1 PHD_FILE: MSMg01no094_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:08 2005
(439 letters)
>mm_chr1_60201583_60202421
Length = 839
Score = 632 bits (327), Expect = 0.0
Identities = 339/343 (98%), Gaps = 2/343 (0%)
Strand = Plus / Minus
Query: 1 aggtattaacaatttgagaggaagtgtagatggcaaatctattttatttcttgaattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aggtattaacaatttgagaggaagtgtagatggcaaatctattttatttcttgaattcag 287
Query: 61 gacatcaataattaaaagtttggacagacatacgtgcacacatacacaccatcccagcag 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 286 gacatcaataattaaaagtttggacagacatacgtgcacatatacacaccatcccagcag 227
Query: 121 ttctagcatttgaaatatccaagca-catgggctggagagatatagcgcaagttaagagc 179
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 226 ttctagcatttgaaatatccaagcacca-gggctggagagatatagcgcaagttaagagc 168
Query: 180 atcaactgatcttccagaagacctgggttcaaatcccagaaaccacaatagtggctcaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atcaactgatcttccagaagacctgggttcaaatcccagaaaccacaatagtggctcaca 108
Query: 240 accatccataagcccagggtcagggggtctgacaccttcttccagcctccccggccccaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 107 accatccataagcccagggtcagggggtctgacaccttcttccagcctccctggccccaa 48
Query: 300 gcatgcaagtaagacattcacatatattaaaaaaagtaaaaat 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 gcatgcaagtaagacattcacatatattaaaaaaagtaaaaat 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
