CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTCCAACAGCTATGAGTGTTCTAGCCTATTTGCATGGGATAAGCATCT
TCTGGGTATACTGTCTCACAAATAGTACATTTCACATCTATGTTACAAAT
AAGGCCTGTGACAGAGTTTAACTAAATCAGTTTTGCAGTAGCAACACCAG
GAGGCCACCAAAATTCTGCTAGAGTTGAATTAGTTCAAGTGCTTTCTACT
GTACCTGAACAAATCAGAGGGATGTCTGAGACAGGGTATAATTAGATCAA
ATACAGTCAAATGCCAATGTAATTCATCAGTAGGTATCATATGAAATAAA
TATATACTTCTTTTGAAAGCTAGCATTACACACACTCCCAAATGAACTTG
TGGTCATGTGTATCACCATCATTTATAGGTTTATTATCTGTAAGGTCTCA
AAGTGAAATCATAATAACAGAAATTTGATATCAGCAAATTAAACTTAACT
TGGAAAGATTAAATGACAGGTCTCACATAATACTTGACATACTTCTGTGG
GGTTATGTTATTCTTATCACTGAAATATAACCTGCCATTTAAATACTCCA
TCTAATCTATCTTTATGTAGAAATTTGAGTTTGTAGCAACATGAAGATGT
TTACAGAATGCTAAGCACTGACTTTTTTTTTAATTAAGG

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACA
CTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGGAACTCACACAATATATACTCACTGATAAGTG
GATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATATAATTTGCTA
AACACATGAAAC

Query= MSMg01no094_p11.b1 MSMg01no094_p11.b1 CHROMAT_FILE:
MSMg01no094_p11.b1 PHD_FILE: MSMg01no094_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:50 2005
         (643 letters)



>mm_chr1_131685479_131686522
          Length = 1044

 Score = 1183 bits (612), Expect = 0.0
 Identities = 633/640 (98%), Gaps = 1/640 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcc-aacagctatgagtgttctagcctatttgcatgggataagcatcttctgg 63
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gaattcttccaaacagctatgagtgttctagcctatttgcatgggataagcatcttctgg 785

                                                                       
Query: 64  gtatactgtctcacaaatagtacatttcacatctatgttacaaataaggcctgtgacaga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gtatactgtctcacaaatagtacatttcacatctatgttacaaataaggcctgtgacaga 725

                                                                       
Query: 124 gtttaactaaatcagttttgcagtagcaacaccaggaggccaccaaaattctgctagagt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gtttaactaaatcagttttgcagtagcaacaccaggaggccaccaaaattctgctagagt 665

                                                                       
Query: 184 tgaattagttcaagtgctttctactgtacctgaacaaatcagagggatgtctgagacagg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgaattagttcaagtgctttctactgtacctgaacaaatcagagggatgtctgagacagg 605

                                                                       
Query: 244 gtataattagatcaaatacagtcaaatgccaatgtaattcatcagtaggtatcatatgaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gtataattagatcaaatacagtcaaatgccaatgtaattcatcagtaggtatcatatgaa 545

                                                                       
Query: 304 ataaatatatacttcttttgaaagctagcattacacacactcccaaatgaacttgtggtc 363
           |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 544 ataaatatatacatcttttgaaagttagcattacacacactcccaaatgaacttgtggcc 485

                                                                       
Query: 364 atgtgtatcaccatcatttataggtttattatctgtaaggtctcaaagtgaaatcataat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atgtgtatcaccatcatttataggtttattatctgtaaggtctcaaagtgaaatcataat 425

                                                                       
Query: 424 aacagaaatttgatatcagcaaattaaacttaacttggaaagattaaatgacaggtctca 483
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aacagaaatttaatatcagcaaattaaacttaacttggaaagattaaatgacaggtctca 365

                                                                       
Query: 484 cataatacttgacatacttctgtggggttatgttattcttatcactgaaatataacctgc 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 364 cataatacttgacatacttctgtggggttatgttattcttatcactgaaatataaccttc 305

                                                                       
Query: 544 catttaaatactccatctaatctatctttatgtagaaatttgagtttgtagcaacatgaa 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 catttaaatactccatctaatctatctttatgtagaaatttgagtttgtagcaacatgaa 245

                                                   
Query: 604 gatgtttacagaatgctaagcactgactttttttttaatt 643
           ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 244 gatgtttacagaatgctcagcactgactttttttttaatt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1044
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1034
Effective search space:   654522
Effective search space used:   654522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)