Query= MSMg01no095_b02.b1 MSMg01no095_b02.b1 CHROMAT_FILE:
MSMg01no095_b02.b1 PHD_FILE: MSMg01no095_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:58 2005
(320 letters)
>mm_chr1_94038746_94039466
Length = 721
Score = 487 bits (252), Expect = e-142
Identities = 293/318 (92%), Gaps = 21/318 (6%)
Strand = Plus / Minus
Query: 6 ggaattcatcaccca-tcacgcttctctgtggacagcggaactctgggtgctttgggctc 64
|||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 434 ggaattcatcgcccacacacgcttctctgtggacagcagaactctgggtgctttgggctc 375
Query: 65 agataagtctagtcaacctctctacatgtgtggggcttccaggccaagcaggcagagatt 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agataagtctagtcaaactctctacatgtgtggggcttccaggccaagcaggcagagatt 315
Query: 125 ggcatttaggggttgccggcaccttgggaatggagtgattcttgccatgtgaaggaatag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggcatttaggggttgccggcaccttgggaatggagtgattcttgccatgtgaaggaatag 255
Query: 185 gcagatcatagaagctcccagaagagctgtatacatttaatggagatgttccaccccccc 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 254 gcagatcatagaagctcccagaagagctgtatacatttaatggagatgt---------cc 204
Query: 245 cccca--aggcctgcactggctaagtctgaagagcagggcatgatgggcatgatgcttgc 302
||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 203 ccccagaaggcctgcactggctaagtctgaagagcagggcatgatg---------cttgc 153
Query: 303 tgcctggggtacatggcc 320
||||||||||||||||||
Sbjct: 152 tgcctggggtacatggcc 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_b02.g1 MSMg01no095_b02.g1 CHROMAT_FILE:
MSMg01no095_b02.g1 PHD_FILE: MSMg01no095_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:58 2005
(433 letters)
>mm_chr1_93869532_93870365
Length = 834
Score = 810 bits (419), Expect = 0.0
Identities = 430/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Plus
Query: 1 tctgaagn-atggtgagcagtagtggaggggctggtaatggacagaagtcaggtccttgg 59
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaagagatggtgagcagtagtggaggggctggtaatggacagaagtcaggtccttgg 260
Query: 60 ctgggagaaccattctggccagcgtgagaatgggacagtgagtgtacactgccatccctc 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggagaatcattctggccagcgtgagaatgggacagtgagtgtacactgccatccctc 320
Query: 120 tctccacaggttcttttggtagtgaaagggtgactaatttgtggaccaaacttggccgga 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctccacaggttcttctggtagtgaaagggtgactaatttgtggaccaaacttggccgga 380
Query: 180 aagcaaaacagacacagaagggccagctctatattatctactgtgttcctaccctggcct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcaaaacagacacagaagggccagctctatattatctactgtgttcctaccctggcct 440
Query: 240 ctcaccatctagtattctcatgctaggaaggacagaactatgagagaaatgaagggacat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcaccatctagtattctcatgctaggaaggacagaactatgagagaaatgaagggacat 500
Query: 300 gctactaagagctcaggtgcccagggcaaggacatactgtgggggagatagaatctgggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctactaagagctcaggtgcccagggcaaggacatactgtgggggagatagaatctgggt 560
Query: 360 gggtgtctgagaagtatggggtcaccacccaggggattagcaccctgagggatgtagacc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtgtctgagaagtatggggtcaccacccaggggattagcaccctgagggatgtagacc 620
Query: 420 ctgatagggaatct 433
||||||||||||||
Sbjct: 621 ctgatagggaatct 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
