CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATTGATTTTAACAGCTGAGTAGTACTCCATTGTGTAAATGTAGCACA
TTTTCTGTATCGATTCCTCTGTTGAGGAACATCTGTGTTCTTTCCAGTTT
CTGGCTGGTGTGGATCTATCCCATATACAGTCACCAAACCCAGACATTAT
TGTGGATGTCAACAAGTGCTTGCTGACAGGAGACTGATATAGCCTGTGCT
TGGAGAGCTCACACATCAAAGAGGAAAACCTACTACTGGCACTTTCCTAA
ATCTGCATAATTTCTGTGTTCTAAGTACTTAGCTTTATATTACAGATAAG
TATAACTCCTCCTTGTCGTCAAGGACAGCTCTTCTGTACAGCAGACGGAG
AGCATTAGAGAAATTCAAACTGGTTAAAACGCAGAGACTTTGGTATGCCC
ATCCCAATTGACTCATATACAATACAGCCTCTACATCTAAGGCTCAGGGA
CATTTTCAGTGGAAGAAAAGACATAAAGACTGTAAGAGGCAGAAGACCAA
GATTCCTGATGTTAAATAGTATCTTGTAGACACTGCAGGGATGGTGCTCC
TATGAAATTGCAACTATTTGTCTGCCTAAACAAGACTTGCTTAATAACAA
CCCCAGCTGACCTGTCATCATAGATAAAATATCATAACGCCCCCCACTCT
TAAATGCAGAGTTTCATGT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTAAAAAATGTAACTGGGATTTCAA
AGGCAATGGTGTTGGTATTCTGCTGCAAATGTGCACTGGATCAATGAGTT
TTCTGGTTGAATCATGAGAGTGTTAAGCATGAGGAACATGTCATCTGAAA
ATAAAAATAATTTGAATTATTTTCAATCCTCATCTTTCTTTCTCTTTTTA
TTTTAGCTCTATCTCTACCTTTGGTCAGGGTTTTGAGCAAGTCCAGTGAA
AATAAGAAAACTTGGCCTGTTAATTTTTCCTTTTATGGAAAATAGAGTCT
TTTCTCAAATAATACTATCTCAATTAGAGTTTGCCATCATTCTACTCCCA
GTTTCTTCCCCACCTCCTCTCCTTTCCAGATCTATTCCTTTTTGTCTTTC
ATTAGAAACAAACAGGCTTCTATGAGATAATATTAAAATGTAACAAAATA
AAATAAAATAAAATGAATGCTATCCTTCAAATGTCCCTTCATCTTCTTTT
TCTCTCTCTCCTGATTTGATCCTTTTCTTCAAGCTCCCTAATCCTTAATT
GCTCATTCTGTTTTCCTTTCATAAAAAGATCTGGTTCTTCCCTCCATTGT
TCCAAGGATTTTTCACTTAGCTATCAAAAACTTATAATCTAACATTCAAT
ATTAGTTTACCTGCCCCGA

Query= MSMg01no095_e05.g1 MSMg01no095_e05.g1 CHROMAT_FILE:
MSMg01no095_e05.g1 PHD_FILE: MSMg01no095_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:13 2005
         (521 letters)



>mm_chr1_19528560_19529480
          Length = 921

 Score =  855 bits (442), Expect = 0.0
 Identities = 507/554 (91%), Gaps = 41/554 (7%)
 Strand = Plus / Plus

                                                                       
Query: 5   aaaaatgtaactgggatttcaaaggcaatggtgttggtattctgctgcaaatgtgcactg 64
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 aaaaatgtaactgggatttcaaaggcaatggtgttggtattctgctccaaatgtgcactg 264

                                                                       
Query: 65  gatcaatgagttttctggttgaatcatgagagtgttaagcatgaggaacatgtcatctga 124
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 265 gatcaatgagttttctggttgaatcatgagagtgttaagcgtgaggaacatgtcatctga 324

                                                                       
Query: 125 aaataaaaataatttgaattattttcaatcctcatctttctttctctttttattttagct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaataaaaataatttgaattattttcaatcctcatctttctttctctttttattttagct 384

                                                                       
Query: 185 ctatctctacctttggtcagggttttgagcaagtccagtgaaaataagaaaacttggcct 244
           ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 ctatctctaccttaggtcagggttttgaacaagtccagtgaaaataagaaaacttggcct 444

                                                                       
Query: 245 gttaatttttccttttatggaaaatagagtcttttctcaaataatactatctcaattaga 304
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 gttaatttttccttttatggaaaatagagtcttttctcaaataatac-atctcaattaga 503

                                                                       
Query: 305 gtttgccatcattctactcccagtttcttccccacctcctctcctttccagatctattcc 364
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 504 gtttgccatccttctactcccagtttcttccccacctcctctcctttccagatctactcc 563

                                                                       
Query: 365 tttttgtctttcattagaaacaaacaggcttctatgagataatattaaaatgtaacaaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttttgtctttcattagaaacaaacaggcttctatgagataatattaaaatgtaacaaaa 623

                                                                       
Query: 425 taaaataaaataaaatgaatgctatccttcaaatgtccctt------------------- 465
           |||||||||||||||||||||||||||||||||||||||||                   
Sbjct: 624 taaaataaaataaaatgaatgctatccttcaaatgtcccttaatttaagctgttttcccc 683

                                                                       
Query: 466 -------------------catcttctttttctctctctcctgatttgatccttttcttc 506
                              |||||||||||||||||||  ||||||||||||||||||||
Sbjct: 684 taatttcctctttaaacttcatcttctttttctctctc--ctgatttgatccttttcttc 741

                         
Query: 507 aagctccctaatcc 520
           ||||||||||||||
Sbjct: 742 aagctccctaatcc 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space:   465521
Effective search space used:   465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)