Query= MSMg01no095_e08.b1 MSMg01no095_e08.b1 CHROMAT_FILE:
MSMg01no095_e08.b1 PHD_FILE: MSMg01no095_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:14 2005
(619 letters)
>mm_chr1_160043439_160044457
Length = 1019
Score = 1127 bits (583), Expect = 0.0
Identities = 603/611 (98%), Gaps = 4/611 (0%)
Strand = Plus / Plus
Query: 7 gaattcactttggaattctatgggatattagaaagcctccacactcctggaagttgaaca 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcactttggaattctatgggatattagaaagcctccacactcctggaagttgaaca 266
Query: 67 atgttctactcaatgatctctgggtcactttctagaattcaatgaaaactaaatagctaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgttctactcaatgatctctgggtcactttctagaattcaatgaaaactaaatagctaa 326
Query: 127 gaaactaaataactttaaaaattactaaaaatatattgttttaagaaatatctggttttg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaaactaaataactttaaaaattactaaaaatatattgttttaagaaatatctggttttg 386
Query: 187 tttttgtatttttttcttttacccaagcagtccactgcacaattcagagacatcttgcaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tttttgtatttttttcttttacccaagcagtccactgcacaattcagagacatcttgcaa 446
Query: 247 ccagagcagaagctgattaatccagaaacagcagtctagcattactgatggcttaaggag 306
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 447 ccagagcagaagctgattaatccagaaacagcagcctagcattactgatggcttaaggag 506
Query: 307 aagtaaatgtggcaggcagctttccaggtgctgccattgccaggggcactgttggtgatg 366
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 507 aagtaaatgtggcaggcagctttccaggtgcttccattgccaggggcactgttggtgatg 566
Query: 367 tctgcataaatttttgtgtaagttagggtagcaacaggtaaccagtgagctgaaaactaa 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tctgcataaatttttgtgtaagttagggtagcaacaggtaaccagtgagctgaaaactaa 626
Query: 427 gaaggtttccagagaatcatggtattttctgacatttttttttcctgcacacatagcctg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaaggtttccagagaatcatggtattttctgacatttttttttcctgcacacatagcctg 686
Query: 487 acaaagatgttttattgttagttgtaatggtctctctgtctctctgtctctgtctctctg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 acaaagatgttttattgttagttgtaatggtctctctgtctctctgtctctgtctctctg 746
Query: 547 tctttctgtctctctgtctctctgcctctctctctctctttctctctctctcacacacac 606
||| |||||||||||| |||||| |||||||||||||| |||||||||||||||||||
Sbjct: 747 tctctctgtctctctgcctctct--ctctctctctctct--ctctctctctcacacacac 802
Query: 607 acacacacaca 617
|||||||||||
Sbjct: 803 acacacacaca 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_e08.g1 MSMg01no095_e08.g1 CHROMAT_FILE:
MSMg01no095_e08.g1 PHD_FILE: MSMg01no095_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:14 2005
(286 letters)
>mm_chr1_160179153_160179838
Length = 686
Score = 485 bits (251), Expect = e-141
Identities = 274/287 (95%), Gaps = 10/287 (3%)
Strand = Plus / Minus
Query: 1 cagaccctgctgaagaggctccccagtgaccggttcctgaactccacacccatctcccag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 482 cagaccctgctgaagaggctccccagtgaccggttcctgaactccacagccatctcccag 423
Query: 61 tactggaccatggactctaacctccagcaccgttatcagcagctgggagccagtttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 422 tactggaccatggactctaacctccagcaccgttatcagcagctgggagccagcttgaaa 363
Query: 121 gtcctgttaaagaagatgcaccggattgtccgccgcctcttcaatctctgcaagcgctgt 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 362 gtcctgttaaagaagatgcaccggatcgtccgccgcctcttcaatctctgcaagcgctgt 303
Query: 181 catcggcagcctcgcttccgcctgcccaaggagaggtgagcacgcaggcttggagcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catcggcagcctcgcttccgcctgcccaaggagaggtgagcacgcaggcttggagcctgc 243
Query: 241 gccca-----ttttttcctggctttagctgctgaggccaggaaagat 282
||||| ||||||||||||||||||||||||||||||||
Sbjct: 242 gcccagcaac-----tcctggctttagctgctgaggccaggaaagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
