Query= MSMg01no095_g14.b1 MSMg01no095_g14.b1 CHROMAT_FILE:
MSMg01no095_g14.b1 PHD_FILE: MSMg01no095_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:25 2005
(611 letters)
>mm_chr1_94009055_94010066
Length = 1012
Score = 1127 bits (583), Expect = 0.0
Identities = 601/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 6 ggaattcaaacagggcctcgggacacaacgggtgttgtttagggccagctatcttcctaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcaaacagggcctcgggacacaacgggtgttgtttagggccagctatcttcctaa 265
Query: 66 cactggaggagctacctttctgcccaggtggtgaacagttcacatttcaaaagggcaaag 125
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 266 cactggaggagctacctttctgcccaggtgatgaacagttcacatttcaaaagggcaaag 325
Query: 126 gtatgtgctcaaagtccagtccaggcacatcatggtaagcggagcctagagagtcccatc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtatgtgctcaaagtccagtccaggcacatcatggtaagcggagcctagagagtcccatc 385
Query: 186 tccatcagtacagaggcctagcctccggaacaagaccccc-agcactgggagctgcctgc 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 386 tccatcagtacagaggcctagcctccggaacaagacccccgagcactgggagctgcctgc 445
Query: 245 cagctctctttcctatacagggctgtctgtgcacagtggagacacatgaatgttccccag 304
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cagctctcttccctatacagggctgtctgtgcacagtggagacacatgaatgttccccag 505
Query: 305 ggacattcaggggatatacaaacaagtgtaccaacaaactgtatacccacttcattccta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggacattcaggggatatacaaacaagtgtaccaacaaactgtatacccacttcattccta 565
Query: 365 aatgcacccccttcagaagcaagctgttggctagttagaagtagcactgtgaacaatggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 566 aatgcacccccttcagaagcaagctgttggctagttagaagtagcactgtgaataatggt 625
Query: 425 cccccagaagttcaaatactaaaagctgattccaaagcactggtcactgggaacaccact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cccccagaagttcaaatactaaaagctgattccaaagcactggtcactgggaacaccact 685
Query: 485 gagcagttatagaacagaactcaggaaatcccttaaagtttcttagcagttcaaaggtat 544
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gagcagttatataacagaactcaggaaatcccttaaagtttcttagcagttcaaaggtat 745
Query: 545 tttaccttcagttaggatctctgttcaatctgagaagcccctccaaatctgtttgtccaa 604
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 746 tttaccttcagttaggatctctgttcaatttgagaagcccctccaaatctgtttgtccaa 805
Query: 605 gagcaga 611
|||||||
Sbjct: 806 gagcaga 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1012
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1002
Effective search space: 602202
Effective search space used: 602202
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_g14.g1 MSMg01no095_g14.g1 CHROMAT_FILE:
MSMg01no095_g14.g1 PHD_FILE: MSMg01no095_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:25 2005
(557 letters)
>mm_chr1_94080839_94081795
Length = 957
Score = 1062 bits (549), Expect = 0.0
Identities = 555/557 (99%)
Strand = Plus / Minus
Query: 1 catctctaggtagcctgtgctgttttgagggccacccttcagggcagagaaaactggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 catctctaggtagcctgtgctgttttgagggccacccttcagggcagagaaaactggagt 535
Query: 61 ggcccaactcagaaagcaaacaaaaggtcatgacatcaaatcccaggcttacaacatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggcccaactcagaaagcaaacaaaaggtcatgacatcaaatcccaggcttacaacatcca 475
Query: 121 gcaaaaagtgacaacagaagtccacttaaggaatccagtcagagttctcagagcacagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gcaaaaagtgacaacagaagtccacttaaggaatccagtcagagttctcagagcacagtg 415
Query: 181 tctcctcaggtaaggcttccaagtaaacagacaaatagcagcagcttgatatcatcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tctcctcaggtaaggcttccaagtaaacagacaaatagcagcagcttgatatcatcaggt 355
Query: 241 cgggcacacttatccaggagaaactgactgtgtaagtcaaagcagtcaaccagcattttc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 354 cgggcacacttatccaggagaaactgactgtgtaagtcgaagcagtcaaccagcattttc 295
Query: 301 aattgagagagtctaagtacaagtcctcatcatggaggagcggctcctttctcttcccta 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 294 aattgagagagtctaagtacaagtcctcatcatggaggagcggctactttctcttcccta 235
Query: 361 ctgcaggcattttcatattgtgggataaacaatagtaatctctgttgtaaatagtctacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ctgcaggcattttcatattgtgggataaacaatagtaatctctgttgtaaatagtctacc 175
Query: 421 ttctagctgttctcaaggacacaatgtcttcaatgcccttagttccttgctgttttccct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ttctagctgttctcaaggacacaatgtcttcaatgcccttagttccttgctgttttccct 115
Query: 481 ttctgtgttacagagccagagagcagcctgacccaggacagggggtttagaggacacttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttctgtgttacagagccagagagcagcctgacccaggacagggggtttagaggacacttg 55
Query: 541 acataaacatgcttggg 557
|||||||||||||||||
Sbjct: 54 acataaacatgcttggg 38
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
