Query= MSMg01no096_a09.b1 MSMg01no096_a09.b1 CHROMAT_FILE:
MSMg01no096_a09.b1 PHD_FILE: MSMg01no096_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:13 2005
(158 letters)
>mm_chr1_90298018_90298576
Length = 559
Score = 284 bits (147), Expect = 1e-81
Identities = 156/159 (98%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 1 ttttatttacttaattactggtaacaaatcatgtccttgctgcctcc-aagccctcagtc 59
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 201 ttttatttacttaattactggtaacaaatcatgtccttgctgcctccaaaggactcagtc 260
Query: 60 tgaggagggtgacaaaatccagatcctacctgtgaccatgtcaggcctgtggggaggcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggagggtgacaaaatccagatcctacctgtgaccatgtcaggcctgtggggaggcag 320
Query: 120 aggggcagggcagctgtgctttggagcgggagtgtgaga 158
|||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggggcagggcagctgtgctttggagcgggagtgtgaga 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 559
Length adjustment: 8
Effective length of query: 150
Effective length of database: 551
Effective search space: 82650
Effective search space used: 82650
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_a09.g1 MSMg01no096_a09.g1 CHROMAT_FILE:
MSMg01no096_a09.g1 PHD_FILE: MSMg01no096_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:14 2005
(327 letters)
>mm_chr1_90438204_90438930
Length = 727
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%)
Strand = Plus / Minus
Query: 1 aaacctatgtggtgacctcaggggaatagctactcaaccagaagagatgaacacaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaacctatgtggtgacctcaggggaatagctactcaaccagaagagatgaacacaaaact 468
Query: 61 tggcatcaaaggttcccaggccgatgagagtcaatgacgaagaaaaccaaggcaagtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tggcatcaaaggttcccaggccgatgagagtcaatgacgaagaaaaccaaggcaagtaag 408
Query: 121 atactcttgactggatatgactatcagcagggttccagggaacaacatttctcctcggga 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 atactcttgactggacatgactatcagcagggttccagggaacaacatttctcctcggga 348
Query: 181 cactcagctgatgagaccaggaagccagtcacatggccagcatcatcctcatctccacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cactcagctgatgagaccaggaagccagtcacatggccagcatcatcctcatctccacag 288
Query: 241 gtgtggggatcaattcctcccacaatgtagtggctcagtatccctggattacatgagaca 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 287 gtgtggggatcaattcctcccacactgtagtggctcagtatccctggattacatgagaca 228
Query: 301 gccatgtgccctgcactcttgcccaga 327
|||||||||||||||||||||||||||
Sbjct: 227 gccatgtgccctgcactcttgcccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
