MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-097H07
Chromosome	1 (Build37)
Map Location	52,119,540 - 52,119,784
singlet/doublet	singlet
Overlap gene	Stat4
Upstream gene	Tmeff2, Sdpr, LOC383504, Obfc2a, Myo1b, EG667010, LOC667014
Downstream gene	LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik, Inpp1, Hibch, 1700019D03Rik, Gdf8
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tmeff2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56363 MGI:1861735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20324 MGI:99513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Obfc2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109019 MGI:1923258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myo1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17912 MGI:107752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667010 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667010 MGI:3645596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC667014 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 176 ESTs, 1 Protein

name	Stat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20849 MGI:103062
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042634 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 127 ESTs, 9 Proteins

name	Stat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20846 MGI:103063
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gls (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14660 MGI:95752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546735 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546735
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Nab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17936 MGI:107564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546736 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546736
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins pseudo : _no_value

name	Gm553 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227091 MGI:2685399
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100042094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins pseudo : _no_value

name	EG433305 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433305 MGI:3646585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 180 ESTs, 22 Proteins pseudo : _no_value

name	5330401P04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227094 MGI:2444113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210010L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98682 MGI:1922925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Inpp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16329 MGI:104848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hibch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227095 MGI:1923792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700019D03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67080 MGI:1914330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdf8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17700 MGI:95691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmeff2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802899 GeneID:56363 MGI:1861735
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein with EGF-like and two follistatin-like domains 2 transcript_id : NM_019790.3

name	Sdpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20270266 GeneID:20324 MGI:99513
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serum deprivation response transcript_id : NM_138741.1

name	Obfc2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802925 GeneID:109019 MGI:1923258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oligonucleotide/oligosaccharide-binding fold containing 2A transcript_id : NM_028696.3

name	Myo1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86990449 GeneID:17912 MGI:107752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IB transcript_id : NM_010863.2

name	LOC667014 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233829 GeneID:667014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 176 ESTs, 1 Protein product : similar to ribosomal protein L15 transcript_id : XM_001477485.1

name	Stat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227227 GeneID:20849 MGI:103062
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal transducer and activator of transcription 4 transcript_id : NM_011487.2

name	LOC100042634 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233871 GeneID:100042634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 127 ESTs, 9 Proteins product : similar to ribosomal protein L23a transcript_id : XM_001478481.1

name	Stat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326481 GeneID:20846 MGI:103063
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal transducer and activator of transcription 1 transcript_id : NM_009283.3

name	Gls (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487312 GeneID:14660 MGI:95752
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutaminase transcript_id : NM_001081081.1

name	Nab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543306 GeneID:17936 MGI:107564
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ngfi-A binding protein 1 transcript_id : NM_008667.2

name	Gm553 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363371 GeneID:227091 MGI:2685399
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : gene model 553, (NCBI) transcript_id : XM_149023.5

name	5330401P04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368519 GeneID:227094 MGI:2444113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5330401P04 gene transcript_id : NM_172654.2

name	2210010L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527045 GeneID:98682 MGI:1922925
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210010L05 gene transcript_id : NM_133829.1

name	2210010L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802942 GeneID:98682 MGI:1922925
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210010L05 gene transcript_id : NM_178081.3

name	Inpp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680456 GeneID:16329 MGI:104848
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol polyphosphate-1-phosphatase transcript_id : NM_008384.1

name	Hibch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122624 GeneID:227095 MGI:1923792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-hydroxyisobutyryl-Coenzyme A hydrolase transcript_id : NM_146108.1

name	1700019D03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367422 GeneID:67080 MGI:1914330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700019D03 gene transcript_id : NM_144953.2

name	Gdf8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130172 GeneID:17700 MGI:95691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth differentiation factor 8 transcript_id : NM_010834.2

name	Tmeff2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790267 CCDS:CCDS14939.1 GeneID:56363 MGI:1861735
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane protein with EGF-like and two follistatin-like domains 2 protein_id : NP_062764.1

name	Sdpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270267 CCDS:CCDS14940.1 GeneID:20324 MGI:99513
definition	GO_component : GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0001786 - phosphatidylserine binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] codon_start : 1 product : serum deprivation response protein_id : NP_620080.1

name	Obfc2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723205 GeneID:109019 MGI:1923258
definition	GO_function : GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 note : nucleic acid binding protein 1 product : oligonucleotide/oligosaccharide-binding fold containing 2A protein_id : NP_082972.2

name	Myo1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86990450 CCDS:CCDS14942.1 GeneID:17912 MGI:107752
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016459 - myosin [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : molecular motor product : myosin IB protein_id : NP_034993.2

name	LOC667014 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233830 GeneID:667014
definition	codon_start : 1 product : similar to ribosomal protein L15 protein_id : XP_001477535.1

name	Stat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755670 CCDS:CCDS14943.1 GeneID:20849 MGI:103062
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence IDA]; GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence IDA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 function : gamma interferon activation site-binding protein product : signal transducer and activator of transcription 4 protein_id : NP_035617.1

name	LOC100042634 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233872 GeneID:100042634
definition	codon_start : 1 product : similar to ribosomal protein L23a protein_id : XP_001478531.1

name	Stat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326482 GeneID:20846 MGI:103063
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IMP] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IMP] codon_start : 1 product : signal transducer and activator of transcription 1 protein_id : NP_033309.3

name	Gls (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487313 GeneID:14660 MGI:95752
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0004359 - glutaminase activity [Evidence IEA] GO_process : GO:0006541 - glutamine metabolism [Evidence IEA] codon_start : 1 product : glutaminase protein_id : NP_001074550.1

name	Nab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543307 CCDS:CCDS14944.1 GeneID:17936 MGI:107564
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0030528 - transcription regulator activity [Evidence IGI]; GO:0016564 - transcriptional repressor activity [Evidence IEA] GO_process : GO:0001958 - endochondral ossification [Evidence IGI]; GO:0042552 - myelination [Evidence IGI]; GO:0016481 - negative regulation of transcription [Evidence IEA]; GO:0045682 - regulation of epidermis development [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0014037 - Schwann cell differentiation [Evidence IGI]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : Ngfi-A binding protein 1 protein_id : NP_032693.2

name	Gm553 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20846679 GeneID:227091 MGI:2685399
definition	codon_start : 1 product : hypothetical protein protein_id : XP_149023.1

name	5330401P04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369934 GeneID:227094 MGI:2444113
definition	codon_start : 1 product : hypothetical protein LOC227094 protein_id : NP_766242.1

name	2210010L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527046 CCDS:CCDS14945.1 GeneID:98682 MGI:1922925
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; macrophage MHC receptor 2 product : hypothetical protein LOC98682 isoform 1 protein_id : NP_598590.1

name	2210010L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017395 CCDS:CCDS14946.1 GeneID:98682 MGI:1922925
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2; macrophage MHC receptor 2 product : hypothetical protein LOC98682 isoform 2 protein_id : NP_835182.1

name	Inpp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680457 CCDS:CCDS14947.1 GeneID:16329 MGI:104848
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA]; GO:0004441 - inositol-1,4-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0031403 - lithium ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : inositol polyphosphate-1-phosphatase protein_id : NP_032410.1

name	Hibch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122625 CCDS:CCDS14948.1 GeneID:227095 MGI:1923792
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : HIBYL-COA-H product : 3-hydroxyisobutyryl-Coenzyme A hydrolase protein_id : NP_666220.1

name	1700019D03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450635 CCDS:CCDS14949.1 GeneID:67080 MGI:1914330
definition	codon_start : 1 product : hypothetical protein LOC67080 protein_id : NP_659202.1

name	Gdf8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754752 CCDS:CCDS14950.1 GeneID:17700 MGI:95691
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0040007 - growth [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IDA] codon_start : 1 note : myostatin product : growth differentiation factor 8 protein_id : NP_034964.1

name	LOC383504 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383504
definition	number : 2 pseudo : _no_value

name	LOC383504 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383504
definition	number : 1 pseudo : _no_value

name	EG667010 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667010
definition	number : 1 pseudo : _no_value

name	LOC546735 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546735
definition	number : 5 pseudo : _no_value

name	LOC546735 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546735
definition	number : 4 pseudo : _no_value

name	LOC546735 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546735
definition	number : 3 pseudo : _no_value

name	LOC546735 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546735
definition	number : 2 pseudo : _no_value

name	LOC546735 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546735
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:124809
definition	standard_name : D19367

name	(CDS detail)
type	STS
link
xref	UniSTS:128681
definition	standard_name : D1Mit323

name	(CDS detail)
type	STS
link
xref	UniSTS:125462
definition	standard_name : MHAa97d7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:165078
definition	standard_name : AI852561

name	(CDS detail)
type	STS
link
xref	UniSTS:234125
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162097
definition	standard_name : RH125275

name	(CDS detail)
type	STS
link
xref	UniSTS:161371
definition	standard_name : RH124549

name	(CDS detail)
type	STS
link
xref	UniSTS:209744
definition	standard_name : RH126810

name	(CDS detail)
type	STS
link
xref	UniSTS:178395
definition	standard_name : AW557864

name	(CDS detail)
type	STS
link
xref	UniSTS:212979
definition	standard_name : RH129682

name	(CDS detail)
type	STS
link
xref	UniSTS:180002
definition	standard_name : AF045565

name	(CDS detail)
type	STS
link
xref	UniSTS:128843
definition	standard_name : D1Mit478

name	(CDS detail)
type	STS
link
xref	UniSTS:123724
definition	standard_name : 26.MMHAP17FA5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:271281
definition	standard_name : PMC154013P1

name	(CDS detail)
type	STS
link
xref	UniSTS:178394
definition	standard_name : U09351

name	(CDS detail)
type	STS
link
xref	UniSTS:125654
definition	standard_name : U06923

name	(CDS detail)
type	STS
link
xref	UniSTS:144512
definition	standard_name : Stat1

name	(CDS detail)
type	STS
link
xref	UniSTS:161506
definition	standard_name : RH124684

name	(CDS detail)
type	STS
link
xref	UniSTS:158792
definition	standard_name : AI314027

name	(CDS detail)
type	STS
link
xref	UniSTS:142261
definition	standard_name : D1Ncl2

name	(CDS detail)
type	STS
link
xref	UniSTS:219328
definition	standard_name : RH137240

name	(CDS detail)
type	STS
link
xref	UniSTS:142262
definition	standard_name : D1Ncl3

name	(CDS detail)
type	STS
link
xref	UniSTS:128518
definition	standard_name : D1Mit18

name	(CDS detail)
type	STS
link
xref	UniSTS:125755
definition	standard_name : U47008

name	(CDS detail)
type	STS
link
xref	UniSTS:267360
definition	standard_name : MARC_12193-12194:1004713732:1

name	(CDS detail)
type	STS
link
xref	UniSTS:124614
definition	standard_name : 46.MMHAP17FH4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:164113
definition	standard_name : AI836200

name	(CDS detail)
type	STS
link
xref	UniSTS:178392
definition	standard_name : AW212394

name	(CDS detail)
type	STS
link
xref	UniSTS:125706
definition	standard_name : U27295

name	(CDS detail)
type	STS
link
xref	UniSTS:178393
definition	standard_name : AV137389

name	(CDS detail)
type	STS
link
xref	UniSTS:164112
definition	standard_name : AI648812

name	(CDS detail)
type	STS
link
xref	UniSTS:161758
definition	standard_name : RH124936

name	(CDS detail)
type	STS
link
xref	UniSTS:142259
definition	standard_name : D1Mit545

name	(CDS detail)
type	STS
link
xref	UniSTS:496661
definition	standard_name : Mstn

name	LOC546736 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233875 GeneID:546736
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_033741.1

name	LOC100042094 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233833 GeneID:100042094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to 40s ribosomal protein S27a pseudo : _no_value transcript_id : XR_033274.1

name	EG433305 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233876 GeneID:433305 MGI:3646585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 180 ESTs, 22 Proteins product : predicted gene, EG433305 pseudo : _no_value transcript_id : XR_033746.1

clone name	MSMg01-173C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118N10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-409P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-341K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356L19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-330A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-446H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-367J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274M21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-097H07.T7 (MSMg01no097_h07.b1)	MSMg01-097H07.TJ (MSMg01no097_h07.g1)
ACC	AG313881	AG313882
length	1,024	758
length of high quality (start - end)	---	247 (135 - 381)
definition	CHROMAT_FILE: MSMg01no097_h07.b1 PHD_FILE: MSMg01no097_h07.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:54:12 2005	CHROMAT_FILE: MSMg01no097_h07.g1 PHD_FILE: MSMg01no097_h07.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:54:12 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CCCTCACCCCCCAAACCAAAAACACCAAAAAACAAAACAGAACACAAAAC CCCCCAAATACATCACCCATAACCTAATTTTTATGCCTTCATACTTCGTA TTATTATATAAAATAGTACCGACAATTAAAAGTTTTTTCCGTCATGCTCT GGAGAGTAAATTGGGCTTATTGGTCGTGGGGGCGGGTGTAATTAATATAC CACTGGTGCTAAACTTCTACTATATCTCTTCAACAGGACACCCCCCATTT TGTATCTTCGCTTATGGTTGTCGACCGGGTTTACTTTCCCTCGCGGCTTG CTTAAAGGGCGGCCGTGAGGCGTATAAATATAGAGTGGGAGTCATATGCG GAACAAAGCGGGGTTGGAGTGAATGTAGGAGCCAACAGGGGATGGAGACG GGCACTCCGAGATGCGACAAATCCGTTAACACACGTGTGGGGATGTGTAA GATGGGTAAATAGTTCCTTGTCGAAATTGTTGTGCGTGCTTCTTTGGTTG GCCTTACATCATCCCCACACCAATTGCGATCTTTGTTTACTAGTCCAAAG CAAACGGATAACAATAAGAACTGGGACTAAAACAGGCAGTGGTATGTATT CCCGTTGTGGACGACCGGAGGAGAAGAGGCCTGGGGTTTAGACAAATAAT AGATGGGGGGGAGGATGAATGGGATGGTTTAGAATCCGCCACCCTGCGGC GTGTTCACCGGTGGAAGAAGTATACCAAAGGGGCGAGGCGAGAATAAATA GAAGATGCGGGCGGGCGGCGCGGGGCGAAATAATGTTCCCAACAAATGGT GGGCCCGGGAGATAAGGCGAAACCACGAAGTTTCAAATCTACATGTGGCA AGCGCCGGCGTTGTAGGCAAACTTGGGAGAGCATTGGATTGTCAACAACA TAATATACGCAAAACTACACGAGCGACAGGTTTTTCCGCGAAATAGATGA GGAGGGAAAAAGTAGGAACGATGAGGAAGAATAGAGAGGCGTCGAAGAGA CGAAACAGGATAGCAAGCACGGCN	NNNNNNNTTTTTTTTTNNNNCCCCCCCNTCCCCCCCCCCGTCCCCCCTTT TTCCTCTCTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCACACATCAGGGTTCAT TTTATTGCTGTTCTGTGAGCTATGTACATAGTCACTACTCACAGGTGAGC CAGAACACATTTTTAATACTTAGGAAAGTGAAATAGTAATTTGGCACTGA ATAAACGGTTGTTTTTCACAAGACATTTTGTCTCAAATATTAAAGTGAGG CATTACATTATAGGGTGTTAAAGAAGAAAATGAACATGTATTAGTTAATG AAAAAAGTTTTGATGTCTGGCCCTTAAAGTATAGGAGTGCGCGATTTAAT CTCACAGATCTGGAGGAAAGCAGAGGCCACGCCAGGGGAAGGAAGTTGAG CGTTGACCGGAAAATGACGATCACAGTCATGTTGTGAGCAGTACCCGGAT CGGAGACGACATTAGTGCGCCCGCAGCATTACAGGAACTCTTCATCCCTC AAGGACAAATTCCCAGCTTATATTAACAACACAGTTTGCACATTATCCCT AACAGAAACCCCTTTTTAGTTAGGAAACACTTTTTAGCGCCATTAACGTA AATAAGGATAACATAGCTTTGTTGAGCGTTAGCTTGCGGCGCACCTTTCC GTAAGCTATATGAAATGAACCTTTATAATTCCAATTCCAGCAGGAATAAT TTTCTCAT
quality values	Open. Hide. 9 9 9 9 9 10 10 12 10 14 13 12 19 17 17 17 12 12 8 7 8 6 6 6 6 10 10 8 8 8 10 9 9 10 10 10 10 10 6 6 8 8 8 8 8 10 23 12 10 10 13 13 10 10 11 11 9 10 9 9 8 8 8 8 9 9 9 8 8 6 6 8 8 8 8 6 8 8 8 10 10 10 10 11 11 11 8 6 6 6 8 8 8 10 10 8 10 8 8 6 6 8 8 8 8 8 8 8 10 10 8 9 8 8 8 6 6 8 10 8 8 8 8 8 10 11 11 11 10 8 8 8 8 10 10 29 21 12 12 11 10 9 9 8 10 8 8 8 8 8 8 8 10 9 8 8 8 8 8 8 8 8 8 7 7 9 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 10 11 8 8 8 12 12 12 12 8 8 6 6 10 8 9 9 9 10 8 8 8 8 8 8 9 9 9 9 8 8 8 8 8 6 6 8 8 10 7 8 7 7 7 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 8 8 6 6 8 8 15 13 12 8 8 8 8 8 8 8 9 8 8 8 8 8 7 6 8 6 6 8 8 8 8 8 8 8 10 10 10 10 10 11 10 11 11 11 12 11 9 9 8 8 8 8 8 8 8 8 9 10 11 10 10 10 12 13 13 13 10 10 8 8 8 8 6 6 6 8 8 8 8 8 6 6 8 8 8 6 6 6 8 6 6 8 8 12 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 9 10 11 11 11 11 10 10 6 6 6 6 6 6 8 8 8 6 6 8 6 6 6 6 11 11 10 10 8 8 8 6 6 6 6 8 8 10 10 10 7 6 6 8 8 8 8 8 8 8 6 6 8 6 8 8 8 10 7 9 7 7 6 8 8 8 9 9 11 9 11 17 10 8 8 9 9 9 8 10 8 8 8 8 6 6 8 6 6 6 6 6 10 6 9 8 8 8 8 6 6 8 8 10 10 10 8 8 12 10 10 8 8 8 6 8 8 8 10 6 6 8 8 8 10 8 8 6 7 8 8 8 18 16 12 10 8 8 8 8 6 6 8 8 11 11 11 8 10 10 9 10 10 8 6 6 6 8 8 8 6 7 8 8 10 8 8 8 8 8 6 6 6 8 8 7 6 8 8 8 9 8 8 6 6 8 8 10 10 10 8 8 6 7 8 8 8 8 8 6 6 8 6 8 8 8 6 6 6 6 6 10 9 10 10 10 11 11 12 12 11 11 10 10 10 10 11 11 10 8 8 8 12 10 8 6 6 8 8 10 10 9 6 6 6 6 8 6 8 8 8 8 8 8 8 8 6 11 11 11 11 11 11 9 10 10 9 8 8 8 10 8 10 11 11 11 10 10 10 10 13 10 9 9 9 9 9 8 8 8 7 7 10 8 14 14 12 11 11 8 8 8 8 8 8 8 12 9 9 10 8 8 6 8 6 6 8 8 12 9 9 9 9 9 10 12 8 8 8 8 8 8 8 6 6 8 8 8 9 9 10 8 6 6 6 8 8 8 8 10 10 10 12 10 10 8 8 8 7 6 6 6 6 8 8 13 11 11 10 8 10 8 7 6 8 8 6 6 6 6 6 6 8 8 13 9 9 9 9 9 8 8 6 8 6 6 8 10 8 8 8 10 8 8 8 8 8 8 8 8 8 12 9 9 9 9 8 9 9 9 9 9 10 10 10 6 8 6 6 6 6 8 8 8 8 8 8 6 6 8 8 9 9 10 10 8 8 8 10 8 8 8 8 8 6 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 9 8 6 8 8 8 8 10 7 7 6 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 7 9 9 8 8 8 10 8 8 8 8 8 6 6 6 8 12 8 8 6 6 8 6 6 6 6 8 10 8 8 8 8 8 8 8 8 8 10 11 11 10 10 10 10 10 10 8 8 6 6 8 8 6 6 6 6 8 6 6 8 7 14 11 12 8 8 6 6 8 6 9 10 10 11 11 11 9 6 8 7 7 12 10 8 8 8 8 8 12 12 12 8 8 8 8 6 6 7 6 6 6 8 8 8 8 8 10 10 21 10 12 12 8 6 6 6 6 7 6 9 8 10 11 8 8 8 8 9 8 8 8 8 8 8 9 9 8 8 10 8 8 8 8 8 8 8 8 8 10 10 9 9 3 0	Open. Hide. 0 0 0 0 0 0 0 3 7 6 6 7 9 7 7 3 0 0 0 0 3 7 7 9 7 7 3 0 3 14 6 6 6 6 7 14 16 21 11 10 10 9 10 9 11 13 10 9 9 8 8 7 7 9 8 13 8 11 10 8 6 8 8 10 8 15 15 12 17 19 13 10 8 8 8 11 21 28 23 22 19 22 17 22 28 39 39 39 23 25 9 9 9 9 8 8 7 7 7 10 12 13 13 12 12 27 27 30 14 14 14 30 29 47 34 23 10 9 9 9 9 9 9 12 14 12 11 10 13 8 6 6 6 10 19 17 39 37 37 35 35 35 39 39 39 39 36 39 39 42 47 47 50 50 50 50 50 48 48 39 39 39 48 48 48 48 48 48 46 42 47 48 48 47 42 32 18 11 11 11 11 24 23 35 24 34 29 36 36 32 30 35 24 32 16 19 17 24 24 28 28 28 42 33 37 37 57 44 44 42 44 42 42 42 43 32 32 32 43 32 32 18 18 32 38 36 32 22 22 24 38 36 42 37 35 32 32 28 27 28 32 32 20 38 38 43 43 57 57 52 52 52 50 43 38 38 38 44 43 52 43 57 52 57 57 57 52 52 52 52 43 43 35 35 35 42 57 57 57 43 39 39 43 42 31 35 35 43 44 38 44 23 23 23 43 43 52 52 43 43 33 33 33 44 43 35 35 44 43 23 23 23 43 32 29 38 38 43 44 43 31 31 32 32 23 27 29 32 32 32 32 32 23 23 32 37 40 42 35 35 32 41 28 28 28 32 26 42 28 28 23 27 25 30 33 37 31 37 37 57 47 57 41 39 37 37 39 47 59 41 41 27 36 31 32 15 15 11 11 10 10 10 12 10 13 24 21 13 13 13 13 13 13 28 28 34 34 28 19 21 15 15 14 15 15 23 23 30 30 30 32 24 24 12 12 12 15 21 18 12 12 11 11 12 15 13 13 10 9 9 9 9 11 12 12 12 18 18 24 19 19 20 23 23 28 28 39 34 32 20 18 15 13 13 18 19 13 15 15 31 31 35 35 39 39 39 32 28 20 20 24 19 21 19 16 13 11 11 13 12 19 20 30 22 22 22 15 15 13 10 9 9 9 14 19 25 17 17 17 21 21 13 18 16 14 14 15 15 12 10 9 9 9 9 9 9 10 10 10 10 10 10 12 12 12 12 12 15 21 23 12 24 18 28 26 22 23 11 11 11 18 17 19 22 22 24 18 16 11 11 11 11 10 10 10 19 10 12 13 16 17 10 13 12 12 10 15 15 23 21 31 30 21 15 10 10 9 8 8 8 8 8 10 10 8 8 9 10 9 9 9 13 21 22 23 28 22 22 12 14 10 10 11 11 11 11 12 12 21 21 11 11 12 15 10 13 13 11 12 11 11 15 24 23 16 9 9 8 11 6 6 8 17 15 17 12 10 10 10 15 9 8 8 15 8 8 10 11 11 11 11 11 11 11 11 25 23 18 13 11 10 9 9 10 9 8 8 8 8 18 12 13 12 10 10 10 8 8 8 10 10 10 10 9 10 10 8 8 8 8 8 8 11 9 9 9 9 8 8 11 10 10 10 11 22 22 23 20 20 23 15 16 13 10 10 10 9 9 10 10 10 10 12 11 11 12 12 12 12 15 13 10 13 12 12 12 16 11 10 10 10 10 11 10 15 10 10 9 9 9 8 8 10 10 10 10 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no097_h07.g1 MSMg01no097_h07.g1 CHROMAT_FILE:
MSMg01no097_h07.g1 PHD_FILE: MSMg01no097_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:12 2005
         (247 letters)



>mm_chr1_52119340_52119986
          Length = 647

 Score =  443 bits (229), Expect = e-129
 Identities = 241/245 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acacatcagggttcattttattgctgttctgtgagctatgtacatagtcactactcacag 60
           ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 201 acacatcagggttcattttattgctgttccgtgagctatgtacatggtcactactcacag 260

                                                                       
Query: 61  gtgagccagaacacatttttaatacttaggaaagtgaaatagtaatttggcactgaataa 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgagcctgaacacatttttaatacttaggaaagtgaaatagtaatttggcactgaataa 320

                                                                       
Query: 121 acggttgtttttcacaagacattttgtctcaaatattaaagtgaggcattacattatagg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 acggttgtttttcacaagacattttgtctcaaatattaaagtgaggcattacattagagg 380

                                                                       
Query: 181 gtgttaaagaagaaaatgaacatgtattagttaatgaaaaaagttttgatgtctggccct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgttaaagaagaaaatgaacatgtattagttaatgaaaaaagttttgatgtctggccct 440

                
Query: 241 taaag 245
           |||||
Sbjct: 441 taaag 445


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space:   151844
Effective search space used:   151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information