Query= MSMg01no098_b17.b1 MSMg01no098_b17.b1 CHROMAT_FILE:
MSMg01no098_b17.b1 PHD_FILE: MSMg01no098_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:06 2005
(482 letters)
>mm_chr1_178998876_178999756
Length = 881
Score = 905 bits (468), Expect = 0.0
Identities = 477/480 (99%), Gaps = 1/480 (0%)
Strand = Plus / Minus
Query: 1 gtagacatcatatggcaatgagttctaaaatacagagttcttcctcttaattataaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gtagacatcatatggcaatgagttctaaaatacagagttcttcctcttaattataaaact 620
Query: 61 tgagctgatatttttatggaagctggctggcagacaaactgtagctgtatcatctatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgagctgatatttttatggaagctggctggcagacaaactgtagctgtatcatctatata 560
Query: 121 aagacctagaatcctgaatacattatattaatttagagagcctctatatctcttttgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aagacctagaatcctgaatacattatattaatttagagagcctctatatctcttttgtca 500
Query: 181 gtagatagccagtggtagaattgattttttttttttctaaagaaacctaaagacttaaag 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 499 gtagatagccagtggtagaattga-tttttttttttctaaagaaacctaaagacttaaag 441
Query: 241 gactattgcagcaacattgtgaccatagcagccgtcaacaccattggcatgttagactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gactattgcagcaacattgtgaccatagcagccgtcaacaccattggcatgttagactca 381
Query: 301 gcttggcagataccatatttttcataattttttttgattatctgttcttcagaaataaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcttggcagataccatatttttcataattttttttgattatctgttcttcagaaataaaa 321
Query: 361 catcaatgccatctcagcatggtgtcccagatttgacaaaacatggtaacaaagtaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catcaatgccatctcagcatggtgtcccagatttgacaaaacatggtaacaaagtaggga 261
Query: 421 gcatcgtagtttatatacgtctcccaaattgttggctactaatataagtaattttttttt 480
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 260 gcatcgtagtttatatatgtctcccaaattgtttgctactaatataagtaattttttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 881
Length adjustment: 10
Effective length of query: 472
Effective length of database: 871
Effective search space: 411112
Effective search space used: 411112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_b17.g1 MSMg01no098_b17.g1 CHROMAT_FILE:
MSMg01no098_b17.g1 PHD_FILE: MSMg01no098_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:06 2005
(467 letters)
>mm_chr1_178842624_178843490
Length = 867
Score = 895 bits (463), Expect = 0.0
Identities = 466/467 (99%)
Strand = Plus / Plus
Query: 1 tttaaagagaataagaattaaaagattgaaaatatgaacatgtatcttatatgtggaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaagagaataagaattaaaagattgaaaatatgaacatgtatcttatatgtggaggt 260
Query: 61 gacagttccttcatgagattactgttacatttattcatgtttttaaaatactctgtgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacagttccttcatgagattactgttacatttattcatgtttttaaaatactctgtgtgt 320
Query: 121 gtttatgaattgataccaaattgatgtttattgatcttggtagaaatgttttgaaggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttatgaattgataccaaattgatgtttattgatcttggtagaaatgttttgaaggtta 380
Query: 181 cttcatagtctgtgatagggtttttggagacaaagtaccagtttgtgttaagaccccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcatagtctgtgatagggtttttggagacaaagtaccagtttgtgttaagaccccaga 440
Query: 241 atacttctttaacacctatacatttctttgttaatcctcagtttcttctctgtacagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacttctttaacacctatacatttctttgttaatcctcagtttcttctctgtacagaga 500
Query: 301 tttctgtcttaggtgttttatatagcaacttcaaagctcaaatgacattccaaaataata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttctgtcttaggtgttttatatagcaacttcaaagctcaaatgacattccaaaataata 560
Query: 361 aatagtttattagtccgtattcctttaaagtcaaggatgtttttttgacaaagctcagag 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatagtttattagtccttattcctttaaagtcaaggatgtttttttgacaaagctcagag 620
Query: 421 gctcacagcgatgaccacaaatacttatgttcataagtgctaggcag 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctcacagcgatgaccacaaatacttatgttcataagtgctaggcag 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
