Query= MSMg01no098_i03.b1 MSMg01no098_i03.b1 CHROMAT_FILE:
MSMg01no098_i03.b1 PHD_FILE: MSMg01no098_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:39 2005
(430 letters)
>mm_chr1_195085081_195085910
Length = 830
Score = 721 bits (373), Expect = 0.0
Identities = 412/425 (96%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 7 gaattctttgtttcgctctaaaccccacttttaatggggttacttgattttctggagtcc 66
||||||||||||| ||||||||||||| |||||||||||||| |||| ||||||||||||
Sbjct: 206 gaattctttgtttagctctaaaccccatttttaatggggttatttgaatttctggagtcc 265
Query: 67 agcttcttaagctctttgtatatattggatattagtccctaga-tttttttaaaatgaca 125
||||| || ||||||||||||||||||||||||||||||| || ||||||| ||| ||||
Sbjct: 266 agctttttgagctctttgtatatattggatattagtccctggatttttttttaaacgaca 325
Query: 126 ctttatttggtgtcttccaggccctaatgctacaccttcacagtctccatgggattatca 185
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cttcatttggtgtcttccaggccctaatgctacaccttcacagtctccatgggattatca 385
Query: 186 atcagcgtttgagtcattagggtgagccgaggtggtaccagggctgtggttccctttctt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atcagcgtttgagtcattagggtgagccgaggtggtaccagggctgtggttccctttctt 445
Query: 246 ctcttgtgtcctttgcctctcctcgagagttaataaacatctccattcttattctttgcc 305
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 446 ctcttgtgtcctttgcctctcctcgagagttaataaacatctccatttttattctttgcc 505
Query: 306 ttctgagttgcttatgttctccagaacttctggtaagaaacacaaaccaagcaaacaggt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttctgagttgcttatgttctccagaacttctggtaagaaacacaaaccaagcaaacaggt 565
Query: 366 cccatgtgctgggtagtaagcctgctttcatctcttccagtttggacagagctttgccgt 425
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 566 cccatgtgctgggtagtaagcctgctttcatctcttccagcttggacagagctttgccgt 625
Query: 426 ttggt 430
|||||
Sbjct: 626 ttggt 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_i03.g1 MSMg01no098_i03.g1 CHROMAT_FILE:
MSMg01no098_i03.g1 PHD_FILE: MSMg01no098_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:39 2005
(185 letters)
>mm_chr1_195229110_195229694
Length = 585
Score = 329 bits (170), Expect = 7e-95
Identities = 179/182 (98%)
Strand = Plus / Minus
Query: 4 agtgactggagaaagactggggccttgcagagaaggctttgagaaagagggaggagttta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgactggagaaagactggggccttgcagagaaggctttgagaaagagggaggagttta 326
Query: 64 aagtaagagttgagccttggaaagcgacaggcaggctgaggatggaaaagctgctcaggc 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagtaagagctgagccttggaaagcgacaggcaggctgaggatggaaaagctgctcaggc 266
Query: 124 ttggagagcagtggtaggaataacagtcatgacatcaggggcctggccactctgtggggc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 265 ttggagagcagtggtaggaataacagtcatgacatcaggggcctggccactccgtgaggc 206
Query: 184 aa 185
||
Sbjct: 205 aa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 585
Length adjustment: 8
Effective length of query: 177
Effective length of database: 577
Effective search space: 102129
Effective search space used: 102129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
