Query= MSMg01no099_e12.b1 MSMg01no099_e12.b1 CHROMAT_FILE:
MSMg01no099_e12.b1 PHD_FILE: MSMg01no099_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:41 2005
(245 letters)
>mm_chr1_92165558_92166205
Length = 648
Score = 418 bits (216), Expect = e-121
Identities = 239/248 (96%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 1 agccctaacttcatcaaagtgaacattctttgaatggtaggctggtagccacactcgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccctaacttcatcaaagtgaacattctttgaatggtaggctggtagccacactcgggc 260
Query: 61 ttccagccaggctgtaaagctattttctttctgatcctgttataatagataacactaaac 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 261 ttccagccaggctgtaaagctattttctttctgttcctgttataatagataacgctaaac 320
Query: 121 atcagaaagt---catctgacaaggcaggtaggtatgatgggtcatctccattgtcccct 177
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 atcagaaagtagtcatctgacaaggcaggtaggtaagatgggtcatctccattgtcccct 380
Query: 178 ggactggatttggagtcatcgaggagacgcatcttctctgggcatgtctggggaagatgg 237
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 ggactggatttggagtcatcgaggagacacatcttctctgggcatgtctggggaagatga 440
Query: 238 accccgga 245
| ||||||
Sbjct: 441 atcccgga 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 648
Length adjustment: 9
Effective length of query: 236
Effective length of database: 639
Effective search space: 150804
Effective search space used: 150804
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no099_e12.g1 MSMg01no099_e12.g1 CHROMAT_FILE:
MSMg01no099_e12.g1 PHD_FILE: MSMg01no099_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:41 2005
(244 letters)
>mm_chr1_92328614_92329257
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Minus
Query: 1 cttaggtcaggttctctaagttggagtctgaacttaaaagatttggcctctcagcagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttaggtcaggttctctaagttggagtctgaacttaaaagatttggcctctcagcagcat 384
Query: 61 tgagtcaggcagagtttctgtggaattgagttgaaggaaagttgaagcacctgaggggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgagtcaggcagagtttctgtggaattgagttgaaggaaagttgaagcacctgaggggaa 324
Query: 121 ttctgtacaggaatcaatcaagcgggcagaaaagagttccatgatttgctgtcagcaaac 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttctgtacaggaatcaatcaagcaggcagaaaagagttccatgatttgctgtcagcaaac 264
Query: 181 agtgaagtcacacaacaacagcaacagaaacaacaacaacaaaccaaattaaaaacaaaa 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agtgaagtcaaacaacaacagcaacagaaacaacaacaacaaaccaaattaaaaacaaaa 204
Query: 241 caca 244
||||
Sbjct: 203 caca 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
