Query= MSMg01no101_o14.b1 MSMg01no101_o14.b1 CHROMAT_FILE:
MSMg01no101_o14.b1 PHD_FILE: MSMg01no101_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:19 2005
(241 letters)
>mm_chr1_130297107_130297747
Length = 641
Score = 427 bits (221), Expect = e-124
Identities = 233/237 (98%)
Strand = Plus / Minus
Query: 1 tcctctcatttataagtataattacccaagaaatacttggaaaacagcgagttccataaa 60
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 437 tcctctcatttataagtataattacccaagaaatatttggaaaacagtgagttccataaa 378
Query: 61 atatgcagtggcctcctattaagatcaaaacaacacatgaccagcttctaaaccagttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atatgcagtggcctcctattaagatcaaaacaacacatgaccagcttctaaaccagttct 318
Query: 121 gggtgttgtgcttaaatacaatgaaaagcttacttatgtttttagctgacgttaaaaatt 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gggtgttgtgcttaaatacagtgaaaagcttacttatgtttttagctgacgttaaaaatt 258
Query: 181 tgaggaccaatgaagcatgtagtgattgaaaagaatattttgtagcacattgtttgg 237
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgaggaccaatgaagcatgaagtgattgaaaagaatattttgtagcacattgtttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no101_o14.g1 MSMg01no101_o14.g1 CHROMAT_FILE:
MSMg01no101_o14.g1 PHD_FILE: MSMg01no101_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:19 2005
(241 letters)
>mm_chr1_130166263_130166903
Length = 641
Score = 398 bits (206), Expect = e-115
Identities = 233/242 (96%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 1 agttccggctgcctgatggttcttcccttac-aaccagtttccttctgacgctcctctgg 59
|||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |
Sbjct: 201 agttccggctgcctgatggttcttcctttacaaaccagtttccttctgatgctcctctag 260
Query: 60 aagaagcgaggcagtttgctgcacgggtaagtttataaagatggctgtgtgggttagtga 119
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 261 aagaagcgaggcagtttgctgcacaggtaagtttataaagatggttgtgtgggttagtga 320
Query: 120 agccttgcagaagaagtttcaaagcagaacttgaaggatatagataaattttgacttatc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 agccttgcagaagaagtttcaaagcagaacttgaaggatatagataaattttgacttagc 380
Query: 180 tccagaagaataacaggagacagccctgagatggaaggctttctggcttgttactatacg 239
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 381 tccagaagaataacaggagacagccctgagatggaaggctttctggcttgt-attatacg 439
Query: 240 tg 241
||
Sbjct: 440 tg 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
