This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
MSMg01-104F03
Chromosome
1 (Build37)
Map Location
113,448,129 - 113,448,674
singlet/doublet
singlet
Overlap gene
none
Upstream gene
EG626652
,
Cdh19
Downstream gene
EG666578
,
Dsel
,
LOC547247
,
EG626897
,
LOC666615
Link
Open Mouse BAC browser
Click to get alignment info.
name
EG626652
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:626652
MGI:3648678
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins
pseudo
: _no_value
name
Cdh19
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:227485
MGI:3588198
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
EG666578
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:666578
MGI:3648321
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 3 Proteins
pseudo
: _no_value
name
Dsel
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:319901
MGI:2442948
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC547247
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:547247
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 312 ESTs, 7 Proteins
pseudo
: _no_value
name
EG626897
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:626897
MGI:3647267
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
LOC666615
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:666615
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Cdh19
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124487064
GeneID:227485
MGI:3588198
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: cadherin 19, type 2
transcript_id
: NM_001081386.1
name
Dsel
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124486780
GeneID:319901
MGI:2442948
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: dermatan sulfate epimerase-like
transcript_id
: NM_001081316.1
name
Cdh19
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124487065
GeneID:227485
MGI:3588198
definition
GO_component
: GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0005509 - calcium ion binding [Evidence IEA]
GO_process
: GO:0007156 - homophilic cell adhesion [Evidence IEA]
codon_start
: 1
product
: cadherin 19, type 2
protein_id
: NP_001074855.1
name
Dsel
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124486781
GeneID:319901
MGI:2442948
definition
codon_start
: 1
product
: dermatan sulfate epimerase-like
protein_id
: NP_001074785.1
name
EG626652
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:626652
definition
number
: 1
pseudo
: _no_value
name
EG626652
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:626652
definition
number
: 2
pseudo
: _no_value
name
EG626897
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:626897
definition
number
: 1
pseudo
: _no_value
name
EG626897
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:626897
definition
number
: 2
pseudo
: _no_value
name
LOC666615
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:666615
definition
number
: 3
pseudo
: _no_value
name
LOC666615
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:666615
definition
number
: 2
pseudo
: _no_value
name
LOC666615
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:666615
definition
number
: 1
pseudo
: _no_value
name
(CDS detail)
type
STS
link
xref
UniSTS:128663
definition
standard_name
: D1Mit308
name
(CDS detail)
type
STS
link
xref
UniSTS:224761
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:224560
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:167277
definition
standard_name
: D1Ertd507e
name
(CDS detail)
type
STS
link
xref
UniSTS:268150
definition
standard_name
: MARC_16903-16904:1022861972:1
name
(CDS detail)
type
STS
link
xref
UniSTS:128606
definition
standard_name
: D1Mit26
name
(CDS detail)
type
STS
link
xref
UniSTS:128860
definition
standard_name
: D1Mit492
name
EG666578
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:149234224
GeneID:666578
MGI:3648321
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 3 Proteins
product
: predicted gene, EG666578
pseudo
: _no_value
transcript_id
: XR_001894.2
name
LOC547247
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149234259
GeneID:547247
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 312 ESTs, 7 Proteins
product
: similar to 60S ribosomal protein L9
pseudo
: _no_value
transcript_id
: XR_033732.1
clone name
MSMg01-144C11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192J08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192K08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-477J09
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-424L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-507N03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-386O15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-535A17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309L10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192K07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-268O08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-126D11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-405G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-537J12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-369E19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-424N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-418O01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-453K12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-345O21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-450L11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-115A24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-522F15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-301P01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-127J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-441J02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-098I11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-101F02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-148O04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-199A19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-304A04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-390L07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-145O12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-538O13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-187N19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096K23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-305L05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-356J17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-340O05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-403C17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-543E06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488J13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-178C06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-113K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-353A23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-115J19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-145M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-322D15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483C01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-104F03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-148B16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-080M05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-083C22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-094E20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-515M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-136O10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-433O08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-491O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-533N18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-440E03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-095M15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-522E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-433O03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483H19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-326K07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-121P10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-137K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-440O09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-497G06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-397O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-532N17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-496O23
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-442P20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-477O02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-470J06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-507C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-391E09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-366K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-267L14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-131A13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-352H02
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-268P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-412E11
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-311A07
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-144N04
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-425N21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-055E10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-505O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125P06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-276L06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-169O07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-262J12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-328L18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-118E09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-090O11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-028B21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246J12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-097L22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-262P05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-208B20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-310M19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-190N09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-216G12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061J12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-218J16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-271L14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-257L03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-340D03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-170L07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-292D12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-278K16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-071B17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-227H21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-227B16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-215I22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-125O16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-022O24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-126I11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-256J13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-256H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-174N04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-059F24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-157M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085A20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-350J06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-107B22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-107B23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-095L03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-178J09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-017G17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191C23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-065C19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-131O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-118H19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-086K04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-264I11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-277A11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291C22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-298P16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-163J17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-083B15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-164I08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-043M17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-332L17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-304F04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-181J21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-236O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-154C17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-277H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-228I01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-143D20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-091B06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-006A23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-255E05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-329M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-049O09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-071A18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094O03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-008I11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-001B21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-082A19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-274F21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-075E04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-284B08
singlet/doublet
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B6Ng01-328M07
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B6Ng01-251J08
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B6Ng01-316G21
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B6Ng01-079J12
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B6Ng01-043C17
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B6Ng01-107I10
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B6Ng01-202B13
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B6Ng01-003F21
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B6Ng01-349F12
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B6Ng01-032D21
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