Query= MSMg01no105_p12.b1 MSMg01no105_p12.b1 CHROMAT_FILE:
MSMg01no105_p12.b1 PHD_FILE: MSMg01no105_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:46 2005
(522 letters)
>mm_chr1_166322413_166323334
Length = 922
Score = 866 bits (448), Expect = 0.0
Identities = 500/528 (94%), Gaps = 22/528 (4%)
Strand = Plus / Minus
Query: 4 ggaattctttaaatccc--cctcatctgatccgacatttatctaaaagataagtccattc 61
||||||||||||| | | ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 869 ggaattctttaaa-cacaacctcatctgatccaacatttatctaaaagataagtccattt 811
Query: 62 ccactggtcagtggggtaaatcagggaaaaacagtatataacaactcagtcagtcattta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ccactggtcagtggggtaaatcagggaaaaacagtatataacaactcagtcagtcattta 751
Query: 122 ca------gtccattttttaatgtgaaatgtgctgagcctgagttttattt-aaaatgta 174
|| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 750 catttactgtccattttttaatgtgaaa-----------tgagttttatttaaaaatgta 702
Query: 175 agatatcttttttaagtacttttatgaaaactacaaacttctttcataatatgaataacc 234
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 agatatc-tttttaagtacttttatgaaaactacaaacttctttcataatatgaataacc 643
Query: 235 agttcctaaatcacatgtaagtgaatattttcattatatttgaattaagtgcttccaaaa 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 agttcctaaatcacatgtaagtgaatattttcattatatttgaattaagtgcttccaaaa 583
Query: 295 attatgcttataattaactacatggaaataatgatttttgtttactagctggtaataacg 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 582 attatgcttataattaactacatggaaataatgatttttgtttactagctggtattaacg 523
Query: 355 aacaaaaaccaacactcaagattaaaagggtcacatacatcttctggctgcattggaggg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aacaaaaaccaacactcaagattaaaagggtcacatacatcttctggctgcattggaggg 463
Query: 415 ttcttaacatccttctctttggcctttcaagggttaggactgtctcactgacacttcctg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttcttaacatccttctctttggcctttcaagggttaggactgtctcactgacacttcctg 403
Query: 475 agacagcatggctcaggattatttacactgatcgtaactgcgtcagaa 522
||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 402 agacagcatagctcaggattatttacactgatcgtaactgagtcagaa 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_p12.g1 MSMg01no105_p12.g1 CHROMAT_FILE:
MSMg01no105_p12.g1 PHD_FILE: MSMg01no105_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:46 2005
(416 letters)
>mm_chr1_166213128_166213942
Length = 815
Score = 789 bits (408), Expect = 0.0
Identities = 414/416 (99%), Gaps = 1/416 (0%)
Strand = Plus / Plus
Query: 1 aacccaggtcctctgggagaacagccacactcttaagtgctgcgtcatctctccagcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacccaggtcctctgggagaacagccacactcttaagtgctgcgtcatctctccagcacc 260
Query: 61 acctaatttttaaaaattgaaatacagcgactggagggatagctcagcttttaggagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctaatttttaaaaattgaaatacagcgactggagggatagctcagcttttaggagccc 320
Query: 121 tggctgctctttcggaatgttcaaggttgcttcccatcacccacactgggtggttcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctgctctttcggaatgttcaaggttgcttcccatcacccacactgggtggttcacaa 380
Query: 181 tctcctgtaactgtagctccagggaatcagataccaggccttgggcatacatgcatacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcctgtaactgtagctccagggaatcagataccaggccttgggcatacatgcatacac 440
Query: 241 ataaaaatgaatatcattctgggtagcattttatttaatttaacttttacatatgcattt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 ataaaaatgaa-atcattctgggtagcattttatttaatttaacttttacatatgtattt 499
Query: 301 tcagaaattcaatttgttgctttccctttatcatggacatctttcaggcctttgttttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcagaaattcaatttgttgctttccctttatcatggacatctttcaggcctttgttttta 559
Query: 361 gataacacttttaactatctaacttctatcccccgttaattaactcactcctcatg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gataacacttttaactatctaacttctatcccccgttaattaactcactcctcatg 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 815
Length adjustment: 9
Effective length of query: 407
Effective length of database: 806
Effective search space: 328042
Effective search space used: 328042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
