Query= MSMg01no108_a10.b1 MSMg01no108_a10.b1 CHROMAT_FILE:
MSMg01no108_a10.b1 PHD_FILE: MSMg01no108_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:43 2005
(598 letters)
>mm_chr1_171681522_171682519
Length = 998
Score = 1141 bits (590), Expect = 0.0
Identities = 593/594 (99%)
Strand = Plus / Plus
Query: 5 ggaattccaaattcttgcggcccattgtctcaataatctgatcgccaaagggatgggcac 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattccaaattcttggggcccattgtctcaataatctgatcgccaaagggatgggcac 264
Query: 65 aggtgtctctttaaatgtcatcatttcttccaggaaggacagtagcattattatgacgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggtgtctctttaaatgtcatcatttcttccaggaaggacagtagcattattatgacgat 324
Query: 125 tgattctttgggagggaaacatggggaaatgaggctattaggtacctctttttagatagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgattctttgggagggaaacatggggaaatgaggctattaggtacctctttttagatagc 384
Query: 185 tagtcttaaagaccattgaggatggatcagaggaccaaagggaagccaagaaagatctcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtcttaaagaccattgaggatggatcagaggaccaaagggaagccaagaaagatctcc 444
Query: 245 ctgtacactctgggaatcaaagggtttggttgattatttatttggtcattctgaggtcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgtacactctgggaatcaaagggtttggttgattatttatttggtcattctgaggtcca 504
Query: 305 taatttatttgataagggtctgagctggccaaagtacttaaggtgatcacattactgttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taatttatttgataagggtctgagctggccaaagtacttaaggtgatcacattactgttt 564
Query: 365 gagagagaatttcagaatatgggagccatggtgagatttcatgggagagaagcaacattg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagagagaatttcagaatatgggagccatggtgagatttcatgggagagaagcaacattg 624
Query: 425 agagaggctgctctgatagagatggtggcattagtctccagccaggctgcggggacaaac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agagaggctgctctgatagagatggtggcattagtctccagccaggctgcggggacaaac 684
Query: 485 aaaaccaagcacagaaaagagctccctaagtcttgggctgatgttcatctgggaggaact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaaccaagcacagaaaagagctccctaagtcttgggctgatgttcatctgggaggaact 744
Query: 545 gtgtggccaaggagtacagagggtcgcttcctattttgtagcacgaagtcacac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gtgtggccaaggagtacagagggtcgcttcctattttgtagcacgaagtcacac 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_a10.g1 MSMg01no108_a10.g1 CHROMAT_FILE:
MSMg01no108_a10.g1 PHD_FILE: MSMg01no108_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:43 2005
(468 letters)
>mm_chr1_171824550_171825417
Length = 868
Score = 775 bits (401), Expect = 0.0
Identities = 417/423 (98%), Gaps = 3/423 (0%)
Strand = Plus / Minus
Query: 44 tttctttctttctttctttctttctttctttctttctttctttctttctttctttctttc 103
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tttctttcttt-tctctttctttctttctttctttctttctttctttctttctttctttc 757
Query: 104 tttctttctttctttctttctttctttctttctttctttctttcttcctctctctctctc 163
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 756 tttctttctttctttctttctttctttctttctttctttctttcttc--ctctctctctc 699
Query: 164 tctctctctctctctctctctctctctctttctctcctttttgttttttctttttttaga 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tctctctctctctctctctctctctctctttctctcctttttgttttttctttttttaga 639
Query: 224 gtttgttcaattagaggttgagtcagtcttggatctagatggaatgtctaccaacctgaa 283
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 638 gtttgttcaattagaggttgagtcagccttggatctagatggaatgtctaccaacctgaa 579
Query: 284 cagatgagcaactgcagtgactcatctttgtattataaatggcaaaggtctcactacata 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cagatgagcaactgcagtgactcatctttgtattataaatggcaaaggtctcactacata 519
Query: 344 ttattgtatttggtccaccacaaaatcctgtgtggtagaggttgattgatctatattttc 403
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 518 ttattgtatttggtccaccacaaaatcctgtgtggcagaggttgattgatctatattttc 459
Query: 404 ctatttatattgctttatgtttcctcacagtaatgtaaactactttgtttggatagcgtt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ctatttatattgctttatgtttcctcacagtaatgtaaactactttgtttggatagcgtt 399
Query: 464 tca 466
|||
Sbjct: 398 tca 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 166
Number of extensions: 47
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's gapped: 41
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
