Query= MSMg01no108_e11.b1 MSMg01no108_e11.b1 CHROMAT_FILE:
MSMg01no108_e11.b1 PHD_FILE: MSMg01no108_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:05 2005
(508 letters)
>mm_chr1_190978030_190978934
Length = 905
Score = 917 bits (474), Expect = 0.0
Identities = 496/506 (98%), Gaps = 7/506 (1%)
Strand = Plus / Minus
Query: 5 gaattccacatgactgatattttttctactctgtgcatgcttacaggaaacaggattctg 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 705 gaattccacatgactgatattttttctactctgtgcatgcctacaggaaacaggattctg 646
Query: 65 ctgcctggggtagtagcatttgtctctgcaatgtcttcgtgtgggtagtggttagggaaa 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 645 ctgcctggggtagtagcatttgtctctgcaatgtctttgtgtgggtagtggttagggaaa 586
Query: 125 tggatgttgaagagatagtcaggagggatcatctataaaagagttctgctgggtgttctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tggatgttgaagagatagtcaggagggatcatctataaaagagttctgctgggtgttctg 526
Query: 185 ccacaaagactgaggagagagaaaaggtgggagcaagggaacatgggattgttagctaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ccacaaagactgaggagagagaaaaggtgggagcaagggaacatgggattgttagctaaa 466
Query: 245 ggctttgagccgttccttcctgtagttgctccaggaggagaagag--actgagctgataa 302
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 465 ggctttgagccgttccttcctgtagttgctccaggaggagaagagacactgagctgataa 406
Query: 303 atctgggtcagggtgttctgctccactggagtacagaggcagtcatgggtggaatggatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 atctgggtcagggtgttctgctccactggagtacagaggcagtcatgggtggaatggatg 346
Query: 363 gttttaatattccacacttagcaatgctcagttttggagtacaatgaaagcaattagaag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gttttaatattccacacttagcaatgctcagttttggagtacaatgaaagcaattagaag 286
Query: 423 ttaactaggatactttctacgtacagtatccaagcatcccttgccttcatcttgttctgt 482
||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 285 ttaactaggatactttcta--t---gtatccaagcatcccttgccctcatcttgttctgt 231
Query: 483 ttccggtcagtttcagtattacactt 508
||||||||||||||||||||||||||
Sbjct: 230 ttccggtcagtttcagtattacactt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 905
Length adjustment: 10
Effective length of query: 498
Effective length of database: 895
Effective search space: 445710
Effective search space used: 445710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_e11.g1 MSMg01no108_e11.g1 CHROMAT_FILE:
MSMg01no108_e11.g1 PHD_FILE: MSMg01no108_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:05 2005
(516 letters)
>mm_chr1_190887348_190888261
Length = 914
Score = 890 bits (460), Expect = 0.0
Identities = 499/512 (97%), Gaps = 2/512 (0%)
Strand = Plus / Plus
Query: 5 cattcatgtttacctattgcagcaactttgaatgggaggttgagctttcatcctggagag 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 cattcatgtttacctattgcagcaactttgaatgggaggttgagctttcatactggagag 264
Query: 65 gagtcactctgccttcctgggtgacaggattctctgccatggccagtgcatctggtaggt 124
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaatcactctgcc-tcctgggtgacaggattctctgccatggccagtgcatctggtaggt 323
Query: 125 ttggctctctcccagttttacagtggggccatctcagtgagtggctacttctttcattat 184
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 324 ttggctctctcccagttttacagtggggtcatctcagtgagcggctacttctttcattat 383
Query: 185 tttttaattaatcacaggaaggaatcatttcatcaaagtcattttcacacacatttccca 244
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 384 tttttaattaatcacaggaaggaatcatttcatc-aagtcattttcacacaaatttccca 442
Query: 245 tctgctctgttctttccttcccccatgctccccacatcctatggctggtagaattctgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctgctctgttctttccttcccccatgctccccacatcctatggctggtagaattctgat 502
Query: 305 gtctagaagctatggaaatgccaggcaggtgtagtggctagtgtataattccaccactta 364
|||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 503 gtctagaagctacagaaatgccaggcaggtgtagtggctcgtgtataattccaccactta 562
Query: 365 gaaggcagaaacagcatccatcaagcaatctggctcacaagactagcctgatcagtgagc 424
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 563 gaaggcagaaacagcatccatcaagcaatctgtctcacaagactagcctgatcagtgagc 622
Query: 425 tctgggtttgactgagagaccctgcctctcagtaaataaggtaatagaggaagacacctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctgggtttgactgagagaccctgcctctcagtaaataaggtaatagaggaagacacctg 682
Query: 485 atatcagtaagccttgaatcgccacactcaga 516
|||||||||||||||| ||| |||||||||||
Sbjct: 683 atatcagtaagccttggatctccacactcaga 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 914
Length adjustment: 10
Effective length of query: 506
Effective length of database: 904
Effective search space: 457424
Effective search space used: 457424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|