Query= MSMg01no108_f06.b1 MSMg01no108_f06.b1 CHROMAT_FILE:
MSMg01no108_f06.b1 PHD_FILE: MSMg01no108_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:09 2005
(270 letters)
>mm_chr1_70916499_70917168
Length = 670
Score = 460 bits (238), Expect = e-134
Identities = 259/266 (97%)
Strand = Plus / Plus
Query: 5 gaattcctcctctatccttctttctagtctcccatttacccgctattctctttgccttgc 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcctcaacccttctttctagtctcccatttacccgctattctctttgccttgc 264
Query: 65 cacacatcccagtaactaaaggatccaagttgcttgcctctactgcagccttatcatccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacacatcccagtaactaaaggatccaagttgcttgcctctactgcagccttatcatccc 324
Query: 125 aagggctgctgaaacctataagaaatgaacaatagctcttgttttcaggatgcttgcctt 184
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggggctgctgaaacctagaagaaatgaacaatagctcttgttttcaggatgcttgcctt 384
Query: 185 ctgggttggagcatgtagaaattgtgatgtgtcccagatctcagtctcattggctgtgag 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgggttgcagcatgtagaaattgtgatgtgtcccagatctcagtctcattggctgtgag 444
Query: 245 actttgggagagttacttgacatgtt 270
|| |||||| ||||||||||||||||
Sbjct: 445 accttgggaaagttacttgacatgtt 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no108_f06.g1 MSMg01no108_f06.g1 CHROMAT_FILE:
MSMg01no108_f06.g1 PHD_FILE: MSMg01no108_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:09 2005
(220 letters)
>mm_chr1_71049791_71050411
Length = 621
Score = 397 bits (205), Expect = e-115
Identities = 217/221 (98%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 1 ccttgaggatg-tacatttctaatgaagattattttagagtcccttgattgcatcctgcc 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccttgaggatgttacatttctaatgaagattattttagagtcccttgattgcatcctgcc 362
Query: 60 cctattggttcactcagagcttcaccatcaagcgaagtggctgagccctgagacactccc 119
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 361 cctattggttcactcagagcttcaccatcaagcaaagtggctgagtcctgagacactccc 302
Query: 120 tctccccatagctcctgcctcccttctcaggcagcactgtctgtcaccagcaccagaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctccccatagctcctgcctcccttctcaggcagcactgtctgtcaccagcaccagaaac 242
Query: 180 cctagaaattgccttttacggctgtaatgagatcagcaaag 220
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 cctagaaattgccttttacggttgtaatgagatcagcaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 621
Length adjustment: 9
Effective length of query: 211
Effective length of database: 612
Effective search space: 129132
Effective search space used: 129132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
