Query= MSMg01no108_m15.b1 MSMg01no108_m15.b1 CHROMAT_FILE:
MSMg01no108_m15.b1 PHD_FILE: MSMg01no108_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:46 2005
(341 letters)
>mm_chr1_139940791_139941531
Length = 741
Score = 629 bits (325), Expect = 0.0
Identities = 337/341 (98%)
Strand = Plus / Minus
Query: 1 gtgcgctaaaacctttgcaatagtttccttctgctggtgggtggggcttctaagcattcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 541 gtgcgctaaaacctttgcaatagtttccttctgctggtgggtggggcttctaagtattcc 482
Query: 61 tttgtatggtgctttttacgggtgtgcatgcatattgtgtcactgatattgctgacagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgtatggtgctttttacgggtgtgcatgcatattgtgtcactgatattgctgacagga 422
Query: 121 atggcactctaaaataaactaagattattcctgtgggatgaaacactttagcttgaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggcactctaaaataaactaagattattcctgtgggatgaaacactttagcttgaattt 362
Query: 181 tgtacagtcttcccaaacaggaccagtatggcattcccaattatgtctcatgggaaccta 240
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 361 tgtacagtcttcccaaacaggaccagcatggcatttccaattatgtctcatgggaaccta 302
Query: 241 ctgctggatcactctctgacatgaggcacccaagagtgagcgacacttatggccagtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgctggatcactctctgacatgaggcacccaagagtgagcgacacttatggccagtgtt 242
Query: 301 tcctcacatagctctcctatctgttattacatacaatacta 341
|||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 tcctcacatagctctcctatctgtcattacatacaatacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_m15.g1 MSMg01no108_m15.g1 CHROMAT_FILE:
MSMg01no108_m15.g1 PHD_FILE: MSMg01no108_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:46 2005
(194 letters)
>mm_chr1_139797041_139797633
Length = 593
Score = 368 bits (190), Expect = e-106
Identities = 193/194 (99%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 1 actggtgtggggaatgcatttttgaacaaacttaagctatataagatcggggtggggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 actggtgtggggaatgcatttttgaacaaacttaagctatataagatcggggt-gggggg 259
Query: 61 gaagtctgaggtctgtgggaaggttcttacaagccttgctgagagggctgcagagggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaagtctgaggtctgtgggaaggttcttacaagccttgctgagagggctgcagagggttt 319
Query: 121 ctgaggctgcagttctgtaagcatcgttctttttgcctctgtgtctttttctcattctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgaggctgcagttctgtaagcatcgttctttttgcctctgtgtctttttctcattctct 379
Query: 181 gtctcccacacact 194
||||||||||||||
Sbjct: 380 gtctcccacacact 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 593
Length adjustment: 8
Effective length of query: 186
Effective length of database: 585
Effective search space: 108810
Effective search space used: 108810
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
