Query= MSMg01no108_o17.b1 MSMg01no108_o17.b1 CHROMAT_FILE:
MSMg01no108_o17.b1 PHD_FILE: MSMg01no108_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:56 2005
(381 letters)
>mm_chr1_64113193_64113973
Length = 781
Score = 706 bits (365), Expect = 0.0
Identities = 377/381 (98%)
Strand = Plus / Minus
Query: 1 acagcttgttactaggaaaccacatcagcattaaatacagtgtgctaattggctatcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 acagcttgttactaggaaaccacatcagcattaaatacagtgtgctaattggctatcctg 522
Query: 61 tttctgcctgggtaccagcctgggcctgctacacagctgtttctgctccttctggttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tttctgcctgggtaccagcctgggcctgctacacagctgtttctgctccttctggttgct 462
Query: 121 aggtaactgcatcatttcttctccccctccccctttgtattctggagggtaattggctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aggtaactgcatcatttcttctccccctccccctttgtattctggagggtaattggctac 402
Query: 181 ttctgctcctggtgttgctgctgggtaccagtctgggcctgctgctctgctgttttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttctgctcctggtgttgctgctgggtaccagtctgggcctgctgctctgctgttttccag 342
Query: 241 agggatttagtgggtgaggggaggaaaggagagaggaagatatgctggcaattaatgtag 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 341 agggatttagtgggggaggggaggaaaggagagaggaagatatgctggcaattaatggag 282
Query: 301 cataagtgcgaattctacacaatgtctggcacctgcttccccttatcctgctttctccac 360
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 281 cataagtgcgaattctacacaatgtctggcacctgcgtctccttatcctgctttctccac 222
Query: 361 taaaccctttagctctgaaaa 381
|||||||||||||||||||||
Sbjct: 221 taaaccctttagctctgaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_o17.g1 MSMg01no108_o17.g1 CHROMAT_FILE:
MSMg01no108_o17.g1 PHD_FILE: MSMg01no108_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:56 2005
(461 letters)
>mm_chr1_63984906_63985765
Length = 860
Score = 830 bits (429), Expect = 0.0
Identities = 453/461 (98%), Gaps = 1/461 (0%)
Strand = Plus / Plus
Query: 1 cagggctacatgcagagatttgctatgggagagacacactgagcttgggcggaagcagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cagggctacatgcagagatttgctatgggagagacacactgagcttgggtggaagcagcc 260
Query: 61 agcaagtctgctctccatccatgagacacttcctcttcacgctgacggctgggttgcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaagtctgctctccatccatgagacacttcctcttcacgctgacggctgggttgcttg 320
Query: 121 cttgctgcagacaagacaactgacctgagggtttgtccttccagaaaccttagcaccgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cttgctgcagacaagacaactgacctgagggtttgtccttccagaaaccttagcaccatc 380
Query: 181 agcggaatgtcacagagaaagaggtcagcaaaggactctcccccaagagctccacgtatc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcagaatgtcacagagaaagaggtcagcaaaggactctcccccaagagctccacgtatc 440
Query: 241 aagttgactcacaggaaattactgctttcaaaggtttttaaaagcttaagcgttggtaat 300
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 441 aagttgactcacaggaaattactgctttcaaaggtttttaaa-gcttaagcattggtaat 499
Query: 301 tttatacagtccaacctactatcacgtccgtgctaataaaaacatatgaagggtttcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttatacagtccaacctactatcacgtccgtgctaataaaaacatatgaagggtttcttt 559
Query: 361 catcctttctcctgccttttttgggatgtttgactgtactgcattgcctgcttccatgcc 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 catcctttctcttgccttttttgggatgtttgactgtactgcattgcctgcttccattcc 619
Query: 421 ttcccaccgaactgccaggtatgaaggtttgcatttacgaa 461
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 ttcccaccgaactgccaggtaggaaggtttgcatttacgaa 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 860
Length adjustment: 10
Effective length of query: 451
Effective length of database: 850
Effective search space: 383350
Effective search space used: 383350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
