Query= MSMg01no110_k07.b1 MSMg01no110_k07.b1 CHROMAT_FILE:
MSMg01no110_k07.b1 PHD_FILE: MSMg01no110_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:17 2005
(666 letters)
>mm_chr1_43539758_43540823
Length = 1066
Score = 1187 bits (614), Expect = 0.0
Identities = 650/662 (98%)
Strand = Plus / Plus
Query: 5 gaattcaagtctttacacttaggccgcagttgcttttactcactgaatcatcttttcagt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagtctttaaacttaggccgcagttgcttttactcactgaatcatcttttcagt 264
Query: 65 tcctaatgcgtatttacttagagcaagagtagctggagctgcagttggctaagtaacccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcctaatgcgtatttacttagagcaagagtagctggagctgcagttggctaagtaacccc 324
Query: 125 tctgccacccgcatcccctcgtggggcagactgtacactgtagtctgtactgatgtgtag 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgccacccgcatctcctcgtggggcagactgtacactgtagtctgtactgatgtgtag 384
Query: 185 tagttcccacagtgggtgcagtagctggtgggacagccattatgggtaaacaatggtggc 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 tagttcccacagtgggcacagtagctggtgggacagccattatgggtaaacaatggtgac 444
Query: 245 ttttattcattttgttcctttgaggattataaaatatgcaggcatgaggaaactcaataa 304
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttattcagtttgttcctttgaaaattataaaatatgcaggcatgaggaaactcaataa 504
Query: 305 atgctctgtgtcatagccctgcatacatgggctcagattatctcatgctccctccatccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgctctgtgtcatagccctgcatacatgggctcagattatctcatgctccctccatccc 564
Query: 365 taggaaaaggctataaatcagatcctcatggtttatttttttatttttgatgagggaaac 424
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 565 taggaaaaggctataaatcagatcctcacggtttatttttttatttttgatgaaggaaac 624
Query: 425 agcagggtcggcaactccagcttatccatgatgtcctgtgactccaagggaattcaccag 484
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcagggtaggcagctccagcttatccatgatgtcctgtgactccaagggaattcaccag 684
Query: 485 tggaactttccagaaagtgaagcccttttaaccccctgcctgaatattactgccttgtaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggaactttccagaaagtgaagcccttttaaccccctgcctgaatattactgccttgtaa 744
Query: 545 cagaaatgtagatagattgaagatttgcagggtaacacaaaactccttttcctgctgctc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cagaaatgtagatagattgaagatttgcagggtaacacaaaactccttttcctgctgctc 804
Query: 605 acagagaacagtagtttgggtctgaattagtcagcgttctctagagtcacagaacttatg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acagagaacagtagtttgggtctgaattagtcagcgttctctagagtcacagaacttatg 864
Query: 665 ga 666
||
Sbjct: 865 ga 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_k07.g1 MSMg01no110_k07.g1 CHROMAT_FILE:
MSMg01no110_k07.g1 PHD_FILE: MSMg01no110_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:18 2005
(635 letters)
>mm_chr1_43634547_43635581
Length = 1035
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 1 aagaataatcaggttgctttcctg-gcaagataattgttatcatatccatggagccttaa 59
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 315 aagaataatcaggttgctttcctgag-aagataattgttatcatatccatggagccttaa 257
Query: 60 tgatcagaaacctaggggtggaaaatattatttagtcatgaatgataagttctatgtatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgatcagaaacctaggggtggaaaatattatttagtcatgaatgataagttctatgtatt 197
Query: 120 tgaatccctctaccaaaactcatgtgaaacttaatacccatagagagctattgagagatg 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 196 tgaatccctctaccaaaactcatgtgaaacttaatacccatagaaagctattgagagatg 137
Query: 180 gcatgaaagtgtttggatcatggggtaatctgccctcataaattgatgattccagttctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gcatgaaagtgtttggatcatggggtaatctgccctcataaattgatgattccagttctg 77
Query: 240 ccttaatgagctaataggttatcttaagagtaggtctgctgtagatgcaatttattttga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ccttaatgagctaataggttatcttaagagtaggtctgctgtagatgcaatttattttga 17
Query: 300 aagtaaatttgagtaa 315
||||||||||||||||
Sbjct: 16 aagtaaatttgagtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
